DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and Lrp4

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_727914.1 Gene:Lrp4 / 32552 FlyBaseID:FBgn0030706 Length:2009 Species:Drosophila melanogaster


Alignment Length:778 Identity:304/778 - (39%)
Similarity:419/778 - (53%) Gaps:83/778 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 SDCADGSDEANELC---MNACPNNEFKCQTVD---------QCIPRSWLCDGSNDCRDKSDEAHC 254
            |:| ..|:|::|.|   .:|.||.:..|:...         :||.:.|||||.:||.|.|||.||
  Fly   198 SNC-QNSNESDENCNPEEDAVPNLQRDCEKTGIHVMCPRTFRCISKYWLCDGDDDCGDYSDETHC 261

  Fly   255 RART-CSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQ-TCRADEFTCGNGRCIQKRWK 317
            .||| |:.|::.|.:  |.|:|..|:||...||.|.|||.:||: ||..:.|||.:|.||...::
  Fly   262 GARTNCTDDQFECLN--GFCIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCNDGYCISLAFR 324

  Fly   318 CDHDDDCGDGSDEKECPVV--PCDSVAEHTC---------TNGACIAKRWVCDGDPDCSDGSDER 371
            ||.:.||.|.|||.:|..|  .|.. .|..|         .:|.||..|:.||||.||.|.|||.
  Fly   325 CDGEHDCNDNSDELKCAAVINSCPE-GEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCGDWSDEE 388

  Fly   372 SCANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANCKN------VTCRADQF 430
            :|   .:..:.|.|:||:|.|. ||:...|.||.::||..|:||:  :|.:      :||.:|:|
  Fly   389 NC---PQKPSLCTSNEYKCADG-TCIPKRWKCDKEQDCDGGEDEN--DCGSLGSEHPLTCGSDEF 447

  Fly   431 QCGDRSCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNATSEFDCGGGQ-------CVPL 488
            .|.:..||.....|:|..|||.|.||.:|.|...||          :|.|...|       ||..
  Fly   448 TCNNGRCILKTWLCDGYPDCAAGEDEVECHLQCDLG----------QFLCPTKQNLTNLKICVHQ 502

  Fly   489 SKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVG-HHCECHEGYKLSPDKRNCQDI 552
            ..:||...:||.||||  ..|......|:...|...||:...| :.|.|..||.:..:|.||.||
  Fly   503 KHICDGHNECPAGEDE--ADCPKERKCSEPSPCEQLCIETTAGSNECACRLGYVMDKNKVNCTDI 565

  Fly   553 NECE--VPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHM 615
            :||:  ....|||.|.|.:|.|||.||.||:..|...: |||..|..:||:|.|.|||::.|.:.
  Fly   566 DECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRS-CKALGGAMTLLVANRWDIRRVTLSNN 629

  Fly   616 EMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEGNEKTVVLTKSSVTSDGLAVDWIY 680
            ..::||.....|.||||..|.|::|||||:| .:.|.....|.....|:.....:..|:|||||:
  Fly   630 RYSAIVKGLHNAIALDFHHRKGLMFWSDVST-DVIKMVYMNGTRVRDVIKWGLESPGGIAVDWIH 693

  Fly   681 NHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGS 745
            :.:::||:....:|::||:|::..|:....||.||:|.:.|.|...:|||||.:|:||||.|||:
  Fly   694 DLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVVHPGEALAFWSDWGPNPKIERAYMDGT 758

  Fly   746 HRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFE 810
            .|..|||..|.||||:.:|....:|||.|.|.:.|..:|.|||.|:::|  ..:|.|||::|.||
  Fly   759 QRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKIL--STHLPHPFALTLFE 821

  Fly   811 DNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQH-PMVVHVYHPYRQPDGVNHCQ----SVNGH 870
            |.:|||||:.:.|..|:|.||::..   |:|...| ||.:|.|||.|||:..:.||    .:.|.
  Fly   822 DTMYWTDWNTKTVSAADKITGKEFR---AVHENFHFPMDIHAYHPARQPEYADRCQKDRRGLRGG 883

  Fly   871 CSHLCLPAPRINERSPRISCACPTGLKLMVDGLMC--VEDPLYLPPVTRPPRARKTKPRPKSP 931
            |||||||    |:.|.|  |.||.||.|..||..|  ..|.|.|....:..|.|..:.....|
  Fly   884 CSHLCLP----NKTSRR--CGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADP 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566
LDLa 178..210 CDD:197566 3/7 (43%)
LDLa 219..254 CDD:238060 16/43 (37%)
LDLa 259..295 CDD:238060 15/35 (43%)
LDLa 343..373 CDD:238060 16/38 (42%)
LDLa 383..415 CDD:197566 14/31 (45%)
Ldl_recept_a 423..459 CDD:395011 15/35 (43%)
LDLa 476..504 CDD:197566 11/34 (32%)
FXa_inhibition 514..549 CDD:464251 10/35 (29%)
EGF_CA 551..581 CDD:214542 16/31 (52%)
LY 662..702 CDD:214531 13/39 (33%)
LY 704..747 CDD:214531 21/42 (50%)
LY 749..790 CDD:214531 19/40 (48%)
Ldl_recept_b 769..815 CDD:459654 20/45 (44%)
FXa_inhibition 864..905 CDD:464251 21/44 (48%)
Lrp4NP_727914.1 LDLa 267..301 CDD:238060 15/35 (43%)
LDLa 306..340 CDD:238060 15/33 (45%)
LDLa 347..390 CDD:238060 17/43 (40%)
LDLa 397..431 CDD:238060 16/36 (44%)
LDLa 442..476 CDD:238060 14/33 (42%)
LDLa 480..521 CDD:238060 15/52 (29%)
FXa_inhibition 576..604 CDD:464251 14/28 (50%)
LY 634..671 CDD:214531 16/37 (43%)
LY 680..714 CDD:214531 11/33 (33%)
LY 718..760 CDD:214531 21/41 (51%)
Ldl_recept_b 740..777 CDD:459654 22/36 (61%)
LY 761..803 CDD:214531 19/41 (46%)
LY 806..838 CDD:214531 15/33 (45%)
FXa_inhibition 882..912 CDD:464251 19/35 (54%)
LY 946..985 CDD:214531
NHL <967..1142 CDD:302697
LY 988..1030 CDD:214531
NHL repeat 998..1037 CDD:271333
NHL repeat 1038..1080 CDD:271333
NHL repeat 1084..1119 CDD:271333
FXa_inhibition 1185..1220 CDD:464251
NHL 1260..>1445 CDD:302697
NHL repeat 1260..1296 CDD:271320
LY 1292..1334 CDD:214531
NHL repeat 1302..1337 CDD:271320
NHL repeat 1345..1383 CDD:271320
FXa_inhibition <1499..1525 CDD:464251
LY 1600..1640 CDD:214531
LY 1643..1686 CDD:214531
LY 1688..1729 CDD:214531
FXa_inhibition 1801..>1825 CDD:464251
Blue background indicates that the domain is not in the aligned region.

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