DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and Lrp10

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001382489.1 Gene:Lrp10 / 305880 RGDID:1310471 Length:712 Species:Rattus norvegicus


Alignment Length:438 Identity:106/438 - (24%)
Similarity:145/438 - (33%) Gaps:136/438 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KSTTSSKSPVTFGNLGEKRRAE----QLFRCACANFNLLLLTLMLGFGKCCTATPTPLNTPSTNT 80
            :.:.||.:..|:..||.|.:..    |....||.:.:|:|.:.:......|.|...||..|..|.
  Rat    50 RDSRSSPANCTWVILGSKEQTVTVRFQKLHLACGSEHLILHSPLQPPVSLCEAPAGPLQLPGGNV 114

  Fly    81 PTSAVSPHNPQTLDESGSLSKVIDGKAFINMGFKFLNVSGKIGTPLGIGQSLEAK-----CDEKQ 140
            ..         |...:|:.:                        |:|.|..|...     |.:::
  Rat   115 TI---------TYSYAGARA------------------------PMGQGFLLTYSQDWLLCLQEE 146

  Fly   141 FQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPNK---------- 195
            |||.:..|||....|||...|.|.||         ||.|.||.|    .|.:|..          
  Rat   147 FQCLNHRCIPAAQRCDGIDACGDGSD---------EAGCRSDPF----PNPVPAPTPPCNLTLED 198

  Fly   196 -----------------------WRCDQES----------------------DCADGSDEANELC 215
                                   |..|...                      |.| |..|...|.
  Rat   199 FYGVFSSPGYSHLASVSHPQSCLWLLDPHDGRRLAVRFTALDLSYGDAVHVYDGA-GPPETPRLL 262

  Fly   216 MNACPNNEFKCQTVD----QCIPRSWLCDGSNDCRDKSDEAHCRARTCSPDEYACKSGEG----- 271
            .:....:..|..||:    |.:........||. |..:...|.|. .|.|.:..|..|.|     
  Rat   263 RSLTHFSNGKAVTVETLSGQAVVSYHTVAWSNG-RGFNATYHVRG-YCLPWDRPCGLGSGLGASE 325

  Fly   272 ----QCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNG------RCIQKRWKCDHDDDCGD 326
                :|...|..||.|.||:||:||..| ..|....:.||..      .|.....:|::...|.|
  Rat   326 NLGERCYSEAQRCDGSWDCADGTDEEGC-PGCPPGHYPCGAAGTPGATACYLPADRCNYQTFCAD 389

  Fly   327 GSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDERSCA 374
            |:||:.|.  .|.. ....|.:..|:.:.|||||.|||:|||||..|:
  Rat   390 GADERRCR--HCQP-GNFRCRDEKCVYETWVCDGQPDCTDGSDEWDCS 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 13/36 (36%)
LDLa 178..210 CDD:197566 11/86 (13%)
LDLa 219..254 CDD:238060 7/38 (18%)
LDLa 259..295 CDD:238060 16/44 (36%)
LDLa 343..373 CDD:238060 15/29 (52%)
LDLa 383..415 CDD:197566
Ldl_recept_a 423..459 CDD:395011
LDLa 476..504 CDD:197566
FXa_inhibition 514..549 CDD:464251
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
Ldl_recept_b 769..815 CDD:459654
FXa_inhibition 864..905 CDD:464251
Lrp10NP_001382489.1 CUB 36..136 CDD:412131 23/118 (19%)
LDLa 142..176 CDD:238060 16/42 (38%)
CUB 192..302 CDD:238001 14/111 (13%)
LDLa <330..353 CDD:238060 11/22 (50%)
LDLa 399..433 CDD:238060 16/34 (47%)
Blue background indicates that the domain is not in the aligned region.

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