DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and Lrp5

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001424443.1 Gene:Lrp5 / 293649 RGDID:1309329 Length:1615 Species:Rattus norvegicus


Alignment Length:378 Identity:152/378 - (40%)
Similarity:212/378 - (56%) Gaps:36/378 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 CKASEGHAS--LLLARRHDIRKIALD--HMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIY 650
            |......||  ||.|.|.|:|.:...  .:|.|.:.:..:.|.|:||.|..|.::|:||:.::|.
  Rat    24 CSLVPAAASPLLLFANRRDVRLVDAGGVKLESTIVASGLEDAAAVDFQFSKGAVYWTDVSEEAIK 88

  Fly   651 KAPIDE-GNEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIP 714
            :..::: |.....::....|:.||||.||:...:|:||:....||:.|..|:..|||....||.|
  Rat    89 QTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQP 153

  Fly   715 RSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNV 779
            |:|||||..|:|||:|||.:|||||||||||.|..|:..|:.||||:|:||.::::||.|.||:.
  Rat   154 RAIALDPAHGYMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSF 218

  Fly   780 ISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQ 844
            |..||.|||.|.:|:...  |.|||::|...|.:|||||..:::...||:|||..:.:  :..|.
  Rat   219 IHRANLDGSFRQKVVEGS--LTHPFALTLSGDTLYWTDWQTRSIHACNKWTGEKRKEI--LSALY 279

  Fly   845 HPMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMVDGLMC---V 906
            .||.:.|....|||.....|:..||.||||||.:|    |.|..|||||||::|..:|..|   .
  Rat   280 SPMDIQVLSQERQPHFHTPCEEGNGGCSHLCLLSP----REPFYSCACPTGVQLQDNGKTCKAGA 340

  Fly   907 EDPLYLPPVTRPPRARKTKPRPKSPRRRLPTG------VQVGHADIRIEINDD 953
            |:.|.|        ||:|..|    |..|.|.      :|||  |||..|..|
  Rat   341 EEVLLL--------ARRTDLR----RISLDTPDFTDIVLQVG--DIRHAIAID 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566
LDLa 178..210 CDD:197566
LDLa 219..254 CDD:238060
LDLa 259..295 CDD:238060
LDLa 343..373 CDD:238060
LDLa 383..415 CDD:197566
Ldl_recept_a 423..459 CDD:395011
LDLa 476..504 CDD:197566
FXa_inhibition 514..549 CDD:464251
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531 14/39 (36%)
LY 704..747 CDD:214531 30/42 (71%)
LY 749..790 CDD:214531 20/40 (50%)
Ldl_recept_b 769..815 CDD:459654 19/45 (42%)
FXa_inhibition 864..905 CDD:464251 21/40 (53%)
Lrp5NP_001424443.1 None
Blue background indicates that the domain is not in the aligned region.

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