DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LpR1 and LRP10

DIOPT Version :9

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:XP_005267567.1 Gene:LRP10 / 26020 HGNCID:14553 Length:721 Species:Homo sapiens


Alignment Length:433 Identity:107/433 - (24%)
Similarity:155/433 - (35%) Gaps:110/433 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IKSTTSSKSPVTFGNLGEKRRAE----QLFRCACANFNLLLLTLMLGFGKCCTATPTPLNTPSTN 79
            ::.:.:|.:..|:..||.|.:..    |....||.:..|.|.:.:......|.|.|:||..|..|
Human    47 VRDSRTSPANCTWLILGSKEQTVTIRFQKLHLACGSERLTLRSPLQPLISLCEAPPSPLQLPGGN 111

  Fly    80 TPTSAVSPHNPQTLDESGSLSKVIDGKAFINMGFKFLNVSGKIGTPLGIGQSLEAKCDEKQFQCH 144
            .           |:..|.:.::...|:.|:      |:.|   ..||....:....|.:::|||.
Human   112 V-----------TITYSYAGARAPMGQGFL------LSYS---QAPLHGASADWLMCLQEEFQCL 156

  Fly   145 SGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPN--------------- 194
            :..|:.....|||...|.|.||         ||.||||.|.......:|:               
Human   157 NHRCVSAVQRCDGVDACGDGSD---------EAGCSSDPFPGLTPRPVPSLPCNVTLEDFYGVFS 212

  Fly   195 ----------------KWRCDQE----------------SDC-----ADGSDEANELCMNACPNN 222
                            .|..|..                .|.     ..|..|::.|..:....:
Human   213 SPGYTHLASVSHPQSCHWLLDPHDGRRLAVRFTALDLGFGDAVHVYDGPGPPESSRLLRSLTHFS 277

  Fly   223 EFKCQTVD----QCIPRSWLCDGSNDCRDKSDEAHCRARTCSPDEYACKSGEG---------QCV 274
            ..|..||:    |.:........||. |..:...|.|. .|.|.:..|..|.|         :|.
Human   278 NGKAVTVETLSGQAVVSYHTVAWSNG-RGFNATYHVRG-YCLPWDRPCGLGSGLGAGEGLGERCY 340

  Fly   275 PLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNG------RCIQKRWKCDHDDDCGDGSDEKEC 333
            ..|..||.|.||:||:||.:| ..|....|.||..      .|.....:|::...|.||:||:.|
Human   341 SEAQRCDGSWDCADGTDEEDC-PGCPPGHFPCGAAGTSGATACYLPADRCNYQTFCADGADERRC 404

  Fly   334 PVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDERSCANV 376
            .  .|.. ....|.:..|:.:.|||||.|||:|||||..|:.|
Human   405 R--HCQP-GNFRCRDEKCVYETWVCDGQPDCADGSDEWDCSYV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 11/31 (35%)
LDLa 178..210 CDD:197566 10/83 (12%)
LDLa 219..254 CDD:238060 7/38 (18%)
LDLa 259..295 CDD:238060 16/44 (36%)
LDLa 343..373 CDD:238060 15/29 (52%)
LDLa 383..415 CDD:197566
Ldl_recept_a 423..459 CDD:278486
LDLa 476..504 CDD:197566
FXa_inhibition 514..549 CDD:291342
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
FXa_inhibition 864..905 CDD:291342
LRP10XP_005267567.1 CUB 34..134 CDD:238001 22/103 (21%)
LDLa 148..182 CDD:238060 14/42 (33%)
CUB 200..310 CDD:238001 13/110 (12%)
LDLa <338..361 CDD:238060 11/22 (50%)
LDLa 407..441 CDD:238060 16/34 (47%)
PRK04654 <581..683 CDD:135173
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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