DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and F32E10.8

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_501228.1 Gene:F32E10.8 / 260105 WormBaseID:WBGene00017995 Length:134 Species:Caenorhabditis elegans


Alignment Length:102 Identity:38/102 - (37%)
Similarity:51/102 - (50%) Gaps:17/102 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 CANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANC--KN------------- 422
            |........|.|:| .:|.|::||:..||:|||..||||..||....|  :|             
 Worm    19 CTTQLFARCPSLTH-IRCFDQLTCIRKSWMCDGKIDCPDHSDELPNICLKRNSYNKLQLQDVSVG 82

  Fly   423 VTCRADQFQCGD-RSCIPGHLTCNGDKDCADGSDERD 458
            :.|.:..|:|.| .|||..:..|:..|||.||||||:
 Worm    83 LKCPSFWFRCTDSSSCIAPNRVCDKYKDCRDGSDERE 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566
LDLa 178..210 CDD:197566
LDLa 219..254 CDD:238060
LDLa 259..295 CDD:238060
LDLa 343..373 CDD:238060 38/102 (37%)
LDLa 383..415 CDD:197566 15/31 (48%)
Ldl_recept_a 423..459 CDD:395011 17/37 (46%)
LDLa 476..504 CDD:197566
FXa_inhibition 514..549 CDD:464251
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
Ldl_recept_b 769..815 CDD:459654
FXa_inhibition 864..905 CDD:464251
F32E10.8NP_501228.1 LDLa <40..61 CDD:238060 12/20 (60%)
LDLa 84..117 CDD:197566 14/32 (44%)
Blue background indicates that the domain is not in the aligned region.

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