DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and Megf6

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001156449.1 Gene:Megf6 / 230971 MGIID:1919351 Length:1572 Species:Mus musculus


Alignment Length:529 Identity:124/529 - (23%)
Similarity:171/529 - (32%) Gaps:182/529 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 PLGIGQSLEAKCDEKQFQC--HSGDC-------IPI-RFVCDGDADCKDHSDEQIKECKF--IEA 177
            |..:..|:...|.|::...  |...|       :|: |..|...|.|.......:....:  :.|
Mouse    33 PRPLQPSMPHVCAEQKLTLVGHRQPCVQAFSRVVPVWRSGCGQQAWCVGQERRTVYYMSYRQVYA 97

  Fly   178 TCSSDQFRCGNG-NCIPNKWRCDQESD-CADGSDEANELCMNACPNNEFKCQTVD----QCIPRS 236
            |.:...|||..| :..|.:..|..:.| ||:    ||..|...|      |.||.    :|.|..
Mouse    98 TEARTVFRCCPGWSQKPGQEGCLSDVDECAN----ANGGCEGPC------CNTVGGFYCRCPPGY 152

  Fly   237 WLCDGSNDCRDKSDEAHCRARTCSPDEYACKSGEGQC------VPLAWMCDQSKDCSDGSDEHNC 295
            .|......|:|..:               |:|..|.|      .|.:::|    :|..|...|..
Mouse   153 QLQGDGKTCQDVDE---------------CRSHNGGCQHRCVNTPGSYLC----ECKPGFRLHTD 198

  Fly   296 NQTCRA-DEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCD 359
            .:||.| ...|.|||.|                                                
Mouse   199 GRTCLAISSCTLGNGGC------------------------------------------------ 215

  Fly   360 GDPDCSDGSDERSCANVTKTTTPCLSHEYQCK-------DRITCLHHSWLCDGDRDCPDGDDEHT 417
                      :..|..:|.|     .|..||:       |...|:..|...||:..|     .||
Mouse   216 ----------QHQCVQLTVT-----QHRCQCRPQYQLQEDGRRCVRRSPCADGNGGC-----MHT 260

  Fly   418 ANCKNVTCRADQFQCGDRSCIPGHLTCNGDKDCADGSDERDCGLSLSLGIN-----QGG----CN 473
              |:.:...|   .||   |.||:......|.|.| .||  |.|.|:...:     ||.    |:
Mouse   261 --CQELRGLA---HCG---CHPGYQLAADRKACED-VDE--CALGLAQCAHGCLNTQGSFKCVCH 314

  Fly   474 ATSEFDCGGGQCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHE 538
            |..|....|.||..:....                  :|.|.:.||||.|.|.....|..|.|..
Mouse   315 AGYELGADGRQCYRIEMEI------------------VNSCEAGNGGCSHGCSHTSTGPLCTCPR 361

  Fly   539 GYKLSPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRD------------PKNHTRCK 591
            ||:|..|::.|.||::|.....|.|:|.|..||::|.|.|||..:            ...|:.| 
Mouse   362 GYELDEDQKTCIDIDDCANSPCCQQVCANTPGGYECSCFAGYRLNTDGCGCEDVDECASGHSGC- 425

  Fly   592 ASEGHASLL 600
              |.|.|.|
Mouse   426 --EHHCSNL 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 9/41 (22%)
LDLa 178..210 CDD:197566 10/33 (30%)
LDLa 219..254 CDD:238060 9/38 (24%)
LDLa 259..295 CDD:238060 9/41 (22%)
LDLa 343..373 CDD:238060 0/29 (0%)
LDLa 383..415 CDD:197566 9/38 (24%)
Ldl_recept_a 423..459 CDD:395011 11/35 (31%)
LDLa 476..504 CDD:197566 4/27 (15%)
FXa_inhibition 514..549 CDD:464251 14/34 (41%)
EGF_CA 551..581 CDD:214542 13/29 (45%)
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
Ldl_recept_b 769..815 CDD:459654
FXa_inhibition 864..905 CDD:464251
Megf6NP_001156449.1 EMI 41..112 CDD:462204 15/70 (21%)
FXa_inhibition 126..161 CDD:464251 12/44 (27%)
vWFA <153..201 CDD:469594 12/66 (18%)
FXa_inhibition 208..244 CDD:464251 12/98 (12%)
FXa_inhibition 250..285 CDD:464251 13/47 (28%)
vWFA <283..324 CDD:469594 13/43 (30%)
FXa_inhibition 337..372 CDD:464251 14/34 (41%)
vWFA <370..409 CDD:469594 15/38 (39%)
vWFA <412..451 CDD:469594 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.

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