DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and egg-2

DIOPT Version :9

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_498537.1 Gene:egg-2 / 187510 WormBaseID:WBGene00019811 Length:548 Species:Caenorhabditis elegans


Alignment Length:572 Identity:169/572 - (29%)
Similarity:233/572 - (40%) Gaps:129/572 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NLGEK--RRAEQL-----FRCACAN----FNLLLLTLMLGFGKCCTATPTPLNTPSTNTPTSA-- 84
            :||||  .|.:||     ..|.||.    ..::|:..::..|...........:||....:|.  
 Worm    19 SLGEKISHRMDQLKEIVSSSCPCAGKFPPVAIVLIVALIILGVIIAVPLVIFLSPSAQAMSSGTR 83

  Fly    85 -VSPHN-------PQTLDESGSLSKVIDGKAFINMGFKFL--NVSGKIGTPLGIGQSLEAKCDEK 139
             :|.|:       |:|       .||.|...........|  |||    |..|.|.:.....|. 
 Worm    84 DLSSHSIRHPKVWPKT-------EKVQDDDLSAIQMTSLLPPNVS----TCSGFGFACTGSIDM- 136

  Fly   140 QFQCHSGDCIPIRFVCDGDADCKDHSDEQ-IKECKFI---EATCSSDQFRCGNGN------CIPN 194
                    .||....|||..||.|.|||: .|||:.|   .|....:..:....:      |:..
 Worm   137 --------IIPSSKRCDGLKDCSDGSDEENCKECQSIYSCRAHIEEESEKKDKTSVLPTLICLTA 193

  Fly   195 KWRCDQESDCADGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAHCRARTC 259
            :..|:...:|.||||||:  |.:.|..::|||...|.|:|.|..|||.:||.::|||::|  ..|
 Worm   194 EKLCNGVENCPDGSDEAS--CRSKCSKDQFKCSGSDACLPISVKCDGVSDCENESDESNC--NKC 254

  Fly   260 SPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCN-QTCRADE-FTCGNGRCIQKRWKCDHDD 322
            ....:.|..   .|:..:.:||...||.||||||.|: :||...| ..|.:|.||.:...||...
 Worm   255 QKGAHKCGK---NCIKASKVCDGIPDCDDGSDEHQCDCKTCSGSEKALCEDGTCIMRSQVCDGKH 316

  Fly   323 DCGDGSDEKECP-------------------------VVPCDSVAE------------HTCT--- 347
            ||.||.||:.||                         |..|..:.|            ||.|   
 Worm   317 DCLDGIDEENCPGSCSNERFSSKLKLLTCDDGNQYSEVEACSGLVEACELNCPKCDPKHTFTCPA 381

  Fly   348 ----NGACIAKRWVCDGDPDCSDGSDERSCANVTKTTTPCL---SHEYQCKDRITCLHHSWLCDG 405
                :..||.:..||||..||.||:||:.|..|.:    |:   |.::.|.::  ||..|..|||
 Worm   382 VGGIHNKCIKRSKVCDGIFDCEDGADEKKCTPVKE----CVVESSIQFTCDNK--CLESSRRCDG 440

  Fly   406 DRDCPDGDDEHTANCKNVTCRADQFQC-GDRSCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQ 469
            ..||.|..||  ..|..  |.:..|:| .|:.|:|.|..|||..:|:|||||..|.....||.:.
 Worm   441 VWDCEDKSDE--KGCDK--CPSRSFKCSADKKCLPFHTRCNGVAECSDGSDEHKCSCQECLGTHH 501

  Fly   470 GGCNATSEFDCG-GGQCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGG 520
                  ..:.|. ..:|:...:||.....||:........|.  ..|.||.|
 Worm   502 ------DTYMCSESNRCLKRGEVCSPYSMCPNATYIDKAYCA--SLALKNSG 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 10/31 (32%)
LDLa 178..210 CDD:197566 6/37 (16%)
LDLa 219..254 CDD:238060 16/34 (47%)
LDLa 259..295 CDD:238060 13/35 (37%)
LDLa 343..373 CDD:238060 16/48 (33%)
LDLa 383..415 CDD:197566 12/34 (35%)
Ldl_recept_a 423..459 CDD:278486 16/36 (44%)
LDLa 476..504 CDD:197566 6/28 (21%)
FXa_inhibition 514..549 CDD:291342 4/7 (57%)
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
FXa_inhibition 864..905 CDD:291342
egg-2NP_498537.1 LDLa 123..159 CDD:238060 14/44 (32%)
LDLa 216..251 CDD:238060 16/34 (47%)
LDLa 254..287 CDD:238060 13/35 (37%)
LDLa 300..327 CDD:238060 12/26 (46%)
LDLa 424..453 CDD:238060 12/32 (38%)
LDLa 456..491 CDD:238060 16/34 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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