DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and M03E7.4

DIOPT Version :9

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001343649.1 Gene:M03E7.4 / 187424 WormBaseID:WBGene00019756 Length:542 Species:Caenorhabditis elegans


Alignment Length:293 Identity:86/293 - (29%)
Similarity:119/293 - (40%) Gaps:59/293 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 AFINMGFKFLNVSGKIGTPLGIGQSLEAKCDEKQFQCHSGDCIP------------IRFVCDGDA 159
            :|:..|...|.|||.     ||.|.:.|:....|..|:|.|.:.            :.:.|    
 Worm     8 SFLISGALLLVVSGN-----GIEQLMVAEGPIPQNFCNSSDLLEEAGLIKSTLGQFLGYEC---- 63

  Fly   160 DCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIP-------NKWRCDQE---SDCADGSDEANEL 214
                  .|:...|::     .||.||.....|.|       ....|:.:   ..|...|....: 
 Worm    64 ------SEEFYHCRW-----QSDGFRTYRKKCKPGLVYDVLGTQNCNYDYNVKSCGVRSGGPVQ- 116

  Fly   215 CMNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAHCRARTCSPDEYACKSGEGQCVPLAWM 279
                |...:|.|...:||:|.|..|||..||..:.||.:|  ..|:..|:|||..| ||:.|...
 Worm   117 ----CNGTDFHCPLSEQCVPMSSRCDGHYDCSMEEDEQNC--PLCTAGEFACKVSE-QCISLDRR 174

  Fly   280 CDQSKDCSDGSDEHNCNQTCRADEFTCG-NGRCIQKRWKCDHDDDCGDGSDEKEC--PVVPCDSV 341
            |:...:|.||:||.:|: .|....|.|| :..||....:||....|..|.||..|  |    ::.
 Worm   175 CNGLIECDDGTDERDCD-VCGHGLFHCGKSNECIPMDERCDGRRQCPHGEDEMLCKKP----ETE 234

  Fly   342 AEHTC-TNGACIAKRWVCDGDPDCSDGSDERSC 373
            .:.|| :....|....||||.|.|.|||||..|
 Worm   235 KKFTCQSRDYEIPTNQVCDGMPQCPDGSDEAYC 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 5/43 (12%)
LDLa 178..210 CDD:197566 9/41 (22%)
LDLa 219..254 CDD:238060 14/34 (41%)
LDLa 259..295 CDD:238060 15/35 (43%)
LDLa 343..373 CDD:238060 14/30 (47%)
LDLa 383..415 CDD:197566
Ldl_recept_a 423..459 CDD:278486
LDLa 476..504 CDD:197566
FXa_inhibition 514..549 CDD:291342
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
FXa_inhibition 864..905 CDD:291342
M03E7.4NP_001343649.1 LDLa 117..152 CDD:238060 14/34 (41%)
LDLa 155..190 CDD:238060 15/35 (43%)
LDLa 193..228 CDD:238060 12/34 (35%)
LDLa 233..267 CDD:238060 14/33 (42%)
PHA03247 <353..496 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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