DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and egg-1

DIOPT Version :9

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_498237.2 Gene:egg-1 / 175804 WormBaseID:WBGene00015083 Length:551 Species:Caenorhabditis elegans


Alignment Length:578 Identity:171/578 - (29%)
Similarity:230/578 - (39%) Gaps:166/578 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KSPVTFGNLGEK--RRAEQL---------FRCA-CANFNLLLLTLMLGFGKCCT----------- 67
            :.|:|   ||||  .|.:||         .|.| |.:..:.|:.|:|.||....           
 Worm    15 EEPMT---LGEKFSHRMDQLKEIIADGGCSRAAKCVSITVCLVLLVLIFGGAIVYLVMSLTSSAQ 76

  Fly    68 --------ATPTPLNTPS-------------TNTPTSAVSPHNPQTLDESG-----------SLS 100
                    .:|..:..|.             ...|.:::.|.|..|....|           ..|
 Worm    77 KMSADSMDISPQAIRHPKFWPPTDKIRFDDLNGIPMTSLFPQNVSTCSGFGFACTGAVHMVIPSS 141

  Fly   101 KVIDGKAFINMGFKFLNVSGKIGTPLGIGQSLEAKCDEKQ--FQCHSGD---------------- 147
            |..||:.....|                  |.|..|.|.|  |.|....                
 Worm   142 KRCDGRRDCEDG------------------SDEENCKECQSVFSCKLRPEEESKKKGRSTVQPTL 188

  Fly   148 -CIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRC-GNGNCIPNKWRCDQESDCADGSDE 210
             |:..:.:||...:|.|.|||.:  ||   ::||.|||:| |:..|:|...:||..:||||.|||
 Worm   189 ICLTAQHLCDNVENCPDGSDEAV--CK---SSCSKDQFKCPGSNACLPLSAKCDGINDCADASDE 248

  Fly   211 ANELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAHCRARTCS-PDEYACKSGEGQCV 274
            .|  | :.|.||..||.  .|||..|.:|||...|.|.|||..|..:.|| .|:..|  .:|.|:
 Worm   249 KN--C-SKCQNNAHKCG--KQCIKASHVCDGVAQCADGSDEQQCDCQRCSGTDKALC--DDGTCI 306

  Fly   275 PLAWMCDQSKDCSDGSDEHNCNQTCRADEF-------TCGNGR-------CIQKRWKCDHDDDCG 325
            ....:||..|||:||.||.:|..:|..:.|       ||.:|:       |......||||    
 Worm   307 MRTQVCDGKKDCTDGMDEEDCPGSCTIESFSPKLKMVTCSDGKQYTEAEACSGSFESCDHD---- 367

  Fly   326 DGSDEKECPVVPCDSVAEHTC-----TNGACIAKRWVCDGDPDCSDGSDERSC-----ANVTKTT 380
                   ||...|......||     ....||::|.||||.|||.||:||.:|     ..:.|.|
 Worm   368 -------CPNSKCHPKLAFTCPASKEARKMCISRRKVCDGTPDCDDGADEINCTPIKECGIAKNT 425

  Fly   381 TPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQFQC-GDRSCIPGHLTC 444
                  :::|..:  ||..|..|||..||.|..||  ..|..  |.:...:| .|:.|:|....|
 Worm   426 ------QFKCDHK--CLDSSRRCDGVWDCEDKSDE--KGCDK--CPSGTIKCAADKKCLPAFTRC 478

  Fly   445 NGDKDCADGSDERDCGLSLSLGI--NQGGCNATSEFDCGGGQCVPLSKVCDKRKDCPD 500
            ||..||:|||||..|.....||:  |...||.::       :|:...:||.....||:
 Worm   479 NGVADCSDGSDELKCSCQECLGVHSNTYMCNESN-------RCLKRDEVCSPYSMCPN 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 11/50 (22%)
LDLa 178..210 CDD:197566 16/32 (50%)
LDLa 219..254 CDD:238060 17/34 (50%)
LDLa 259..295 CDD:238060 15/36 (42%)
LDLa 343..373 CDD:238060 16/34 (47%)
LDLa 383..415 CDD:197566 10/31 (32%)
Ldl_recept_a 423..459 CDD:278486 15/36 (42%)
LDLa 476..504 CDD:197566 5/25 (20%)
FXa_inhibition 514..549 CDD:291342
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
FXa_inhibition 864..905 CDD:291342
egg-1NP_498237.2 LDLa 123..159 CDD:238060 8/53 (15%)
LDLa 216..251 CDD:238060 19/36 (53%)
LDLa 254..287 CDD:238060 17/34 (50%)
LDLa 300..327 CDD:238060 12/28 (43%)
LDLa <391..413 CDD:238060 14/21 (67%)
LDLa 425..455 CDD:238060 13/39 (33%)
LDLa 458..493 CDD:238060 15/34 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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