DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and T13C2.6

DIOPT Version :9

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_872023.2 Gene:T13C2.6 / 174116 WormBaseID:WBGene00020481 Length:911 Species:Caenorhabditis elegans


Alignment Length:1009 Identity:343/1009 - (33%)
Similarity:482/1009 - (47%) Gaps:221/1009 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 GFKFLNVSG-KIG-TPLGIGQSLEAKCD-EKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECK 173
            ||..::::. .:| .|:|   :...||| ...|||..|.|||:.:.||||.||::..||  |.|.
 Worm     9 GFLLISMATISVGLQPMG---APTRKCDATNSFQCQDGRCIPMSWRCDGDIDCQNEEDE--KNCP 68

  Fly   174 FIEATCSSDQFRCG----------NGNCIPNKWRCDQESDCADGSDEANELCMN-ACPNNEFKCQ 227
             |...|.:::.:||          ...||||||.||.|.||.|.|||..  |.| :|...:|:|:
 Worm    69 -ISEVCGAEEHKCGEVKSARSSLERFKCIPNKWVCDGEFDCEDKSDEFQ--CKNVSCQEKQFQCE 130

  Fly   228 TV----DQCIPRSWLCDGSNDCRDKSDEAHCRART--CSPDEYACKSGEGQCVPLAWMCDQSKDC 286
            .:    ..|||.:|:|||..||.:..||.:|.::|  |..:.:.|.:  |.|:...|:||..:||
 Worm   131 ELSGDYSLCIPETWVCDGQRDCTNGKDEQNCTSKTSKCPDNNFQCSN--GNCIFKNWVCDGEEDC 193

  Fly   287 SDGSDE-----HNCNQT---CRADE-FTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVA 342
            ||||||     .|||:|   |...| :.||:|.||..||:||.:.||.|.||||.|..:      
 Worm   194 SDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGECIPSRWRCDAEVDCKDHSDEKNCTAI------ 252

  Fly   343 EHTC---------TNGACIAKRWVCDGDPDCSDGSDERSCANVTKTTTPCLSHEYQCKDRITCLH 398
            :|||         .:..||.|.:||||:.||||||||..||:|          ..:||       
 Worm   253 QHTCKLAEEFACKASHNCINKAFVCDGELDCSDGSDEDDCADV----------RTECK------- 300

  Fly   399 HSWLCDGDRDCPDGDDEHTANCKNVTCRADQFQCGDRSCIPGHLTCNGDKDCADGSDERDCGLSL 463
                 .|:|.||.....:.|...:|.            |||....|||::||.||.||::|.::.
 Worm   301 -----SGERTCPASYGAYGAESGHVV------------CIPASSWCNGEEDCPDGGDEKECNMTA 348

  Fly   464 SLGINQGGCNATSEFDCGGG--QCVPLSKVCDKRK-DCPDGEDEPAGKCGINE-CASKNGGCMHQ 524
            .:     .|...:|::|...  ||:.:||:|...: ||.||......:..|.| |...:.||:.:
 Worm   349 PV-----TCQKGTEYECPSTPLQCIEMSKLCASAQFDCGDGNMSVCSQKKIIEMCKPSSEGCVCR 408

  Fly   525 CIDLKVGHHCECHEGYKLSPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGY---MRDPKN 586
            ...::..:.|.|.:||||  :...|.||||||:.|.|.|||:|..|.::|.|.|||   ..|.|.
 Worm   409 PSFVRGNNVCHCKDGYKL--ENGQCIDINECEIAGVCDQICLNIPGSYRCACHAGYQISFGDTKI 471

  Fly   587 HT-----RCKASEGHASLLLARRHDIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTT 646
            .:     :|:|..|...:||..||.||:..|.:.....:.:|..:|.|:||....|.:.||||.:
 Worm   472 GSGRIANKCRAMGGDPLVLLTNRHTIRQFDLVNKMHFPVSSSPGSAVAMDFHILNGTLIWSDVLS 536

  Fly   647 QSIYKAPIDEGN-------------EKTVVLTKSSV-TSDGLAVDWIYNHVYFTDTHKCTIELTN 697
            :.|.|..|  ||             :..:|||...: |.|||||||:::.:::||.....|.:.:
 Worm   537 KQILKCSI--GNVSNAFLGTDMCDKKHEIVLTGDKIHTPDGLAVDWVHDLLFWTDGGLDQINVLD 599

  Fly   698 FEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYD-VKWPNGI 761
            .:....:||....|:.||:||:||..|.::|:|||...||||:||||.|||.|:..| |.||||:
 Worm   600 MKNGKQRVLYSSDLEEPRAIAVDPEVGLIFWTDWGKKARIERSGMDGQHRTVIVEGDRVVWPNGL 664

  Fly   762 TLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKA 826
            .||.|.||:||.|.|:..|.|.:|.|.....||:|.:|||||||:..|||.:::|||:...|...
 Worm   665 ALDYVDKRVYWADAKIKSIFSCDYWGKNIKTVLHSHQYLRHPFSMAVFEDRLFYTDWEHDGVITV 729

  Fly   827 NKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLP------APRINERS 885
            |||||.|:.  |.|..::.||.|.:||...||...|.|:  |..|.|||||      ..|::|::
 Worm   730 NKFTGADIR--TVMDQVKSPMTVRIYHKQAQPLMQNKCE--NSECDHLCLPRAVYREKERVHEKT 790

  Fly   886 ----PRISCACPTGLKLMVDGLMCVEDPLYLPPVTRPPRARKTKPRPKSPRRRLPTGVQVGHADI 946
                | .||||..  ....|.|.|..|                                      
 Worm   791 WHDRP-FSCACEG--TTASDVLECFAD-------------------------------------- 814

  Fly   947 RIEINDDLQLSTRLPLLPTTFVADQRPVKNHTQIEKTTTPSEQPDSGFIALVVIASLSGFAVLLS 1011
             :|....:.:.|...||..                          .|.:|       :||.::  
 Worm   815 -LETKSGISMFTIFLLLCV--------------------------GGVVA-------AGFVIV-- 843

  Fly  1012 VLLLIGYRYCSKRRINSMNFENPIYRKTTTTEDH 1045
                  .|....|...::||:|||||:||...||
 Worm   844 ------RRKMGPRTFTALNFDNPIYRRTTEEADH 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 16/32 (50%)
LDLa 178..210 CDD:197566 16/41 (39%)
LDLa 219..254 CDD:238060 14/38 (37%)
LDLa 259..295 CDD:238060 15/40 (38%)
LDLa 343..373 CDD:238060 18/38 (47%)
LDLa 383..415 CDD:197566 6/31 (19%)
Ldl_recept_a 423..459 CDD:278486 13/35 (37%)
LDLa 476..504 CDD:197566 11/30 (37%)
FXa_inhibition 514..549 CDD:291342 9/34 (26%)
EGF_CA 551..581 CDD:214542 18/32 (56%)
LY 662..702 CDD:214531 14/40 (35%)
LY 704..747 CDD:214531 22/42 (52%)
LY 749..790 CDD:214531 20/41 (49%)
FXa_inhibition 864..905 CDD:291342 17/50 (34%)
T13C2.6NP_872023.2 LDLa 36..67 CDD:238060 16/32 (50%)
LDLa 73..117 CDD:238060 18/45 (40%)
LDLa 122..161 CDD:238060 14/38 (37%)
LDLa 167..199 CDD:197566 13/33 (39%)
LDLa 214..249 CDD:238060 18/34 (53%)
LDLa 261..292 CDD:238060 15/30 (50%)
LDLa <322..344 CDD:238060 12/21 (57%)
EGF_CA 433..463 CDD:214542 17/29 (59%)
LY 564..606 CDD:214531 14/41 (34%)
LY 606..649 CDD:214531 22/42 (52%)
LY 649..692 CDD:214531 22/42 (52%)
LY 696..736 CDD:214531 22/39 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166217
Domainoid 1 1.000 57 1.000 Domainoid score I7233
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H443
Inparanoid 1 1.050 575 1.000 Inparanoid score I562
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49125
OrthoDB 1 1.010 - - D179614at33208
OrthoFinder 1 1.000 - - FOG0002088
OrthoInspector 1 1.000 - - otm14761
orthoMCL 1 0.900 - - OOG6_103130
Panther 1 1.100 - - O PTHR24270
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7933
SonicParanoid 1 1.000 - - X1052
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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