Sequence 1: | NP_001097934.2 | Gene: | LpR1 / 2768687 | FlyBaseID: | FBgn0066101 | Length: | 1076 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491270.2 | Gene: | lrp-2 / 171981 | WormBaseID: | WBGene00003072 | Length: | 4858 | Species: | Caenorhabditis elegans |
Alignment Length: | 837 | Identity: | 288/837 - (34%) |
---|---|---|---|
Similarity: | 408/837 - (48%) | Gaps: | 100/837 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 136 CDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPNKWRCDQ 200
Fly 201 ESDCADGSDEANELCMNACPNNEF------KCQTVDQCIPRSWLCDGSNDCRDKSDEAHC----- 254
Fly 255 -------RARTC-SPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCN-QTCRADEFTC-GNG 309
Fly 310 RCIQKRWKCDHDDDCGDGSDEKECPVVPCDSV---AEHTCTNGACIAKRWVCDGDPDCSD----- 366
Fly 367 GSDERSC-ANVTKTTTPCLSHEYQCKDR---ITCLHHSWLCDGDRDCPDGDDEHTANCKNV--TC 425
Fly 426 RADQFQCGDRSCIPGHLTCNGDKDCADGSDE--RDCGLSLSLGINQGGCNATSEFDC----GGGQ 484
Fly 485 CVPLSKVCDKRKDCPDGEDE----PAGKCGI--NECASKNGGCMHQCIDLKVG-HHCECHEGYKL 542
Fly 543 SP-DKRNCQDINECEVPGKCSQICVNEIG-GFKCECEAGYMRDPKNHTRCKASEG-HASLLLARR 604
Fly 605 HDIRKIALD-HMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPI----DEGNEKTVVL 664
Fly 665 TKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDS-LDIPRSIALDPIEGWMYW 728
Fly 729 SDWGASPRIERAGMDGSHRTTII-SYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQ 792
Fly 793 VLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQ 857
Fly 858 PDG----VNHCQSVNGHCSHLCLPA--PRINERSPRISCACPTGLKLMVDGLMCVED 908 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LpR1 | NP_001097934.2 | LDLa | 135..167 | CDD:197566 | 11/30 (37%) |
LDLa | 178..210 | CDD:197566 | 16/31 (52%) | ||
LDLa | 219..254 | CDD:238060 | 20/40 (50%) | ||
LDLa | 259..295 | CDD:238060 | 15/36 (42%) | ||
LDLa | 343..373 | CDD:238060 | 16/34 (47%) | ||
LDLa | 383..415 | CDD:197566 | 11/34 (32%) | ||
Ldl_recept_a | 423..459 | CDD:278486 | 12/39 (31%) | ||
LDLa | 476..504 | CDD:197566 | 10/31 (32%) | ||
FXa_inhibition | 514..549 | CDD:291342 | 12/36 (33%) | ||
EGF_CA | 551..581 | CDD:214542 | 8/30 (27%) | ||
LY | 662..702 | CDD:214531 | 12/39 (31%) | ||
LY | 704..747 | CDD:214531 | 21/43 (49%) | ||
LY | 749..790 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 864..905 | CDD:291342 | 12/42 (29%) | ||
lrp-2 | NP_491270.2 | LDLa | 80..119 | CDD:197566 | |
LDLa | 130..162 | CDD:197566 | |||
LY | 668..702 | CDD:214531 | |||
LY | 707..758 | CDD:214531 | |||
LY | 759..801 | CDD:214531 | |||
LDLa | 968..1000 | CDD:197566 | |||
LDLa | 1013..1047 | CDD:238060 | |||
LDLa | 1053..1087 | CDD:238060 | |||
LDLa | 1098..1129 | CDD:238060 | |||
LDLa | 1144..1175 | CDD:238060 | |||
LDLa | 1182..1216 | CDD:238060 | |||
FXa_inhibition | 1276..1305 | CDD:291342 | |||
LY | 1421..1463 | CDD:214531 | |||
LY | 1465..1508 | CDD:214531 | |||
LY | 1521..1555 | CDD:214531 | |||
LY | 2480..2521 | CDD:214531 | |||
LDLa | 2681..2715 | CDD:238060 | 13/40 (33%) | ||
LDLa | 2717..2751 | CDD:238060 | 17/33 (52%) | ||
LDLa | <2774..2798 | CDD:238060 | 15/23 (65%) | ||
LDLa | 2819..2851 | CDD:238060 | 14/32 (44%) | ||
LDLa | 2856..2891 | CDD:238060 | 15/34 (44%) | ||
LDLa | 2904..2938 | CDD:238060 | 16/33 (48%) | ||
LDLa | 2988..3020 | CDD:197566 | 10/31 (32%) | ||
LY | 3231..3270 | CDD:214531 | 11/38 (29%) | ||
Ldl_recept_b | 3296..3336 | CDD:278487 | 16/39 (41%) | ||
LY | 3319..3362 | CDD:214531 | 15/42 (36%) | ||
LY | 3363..3404 | CDD:214531 | 16/43 (37%) | ||
LDLa | 3481..3514 | CDD:197566 | 0/1 (0%) | ||
LDLa | 3574..3609 | CDD:238060 | |||
LDLa | 3614..3649 | CDD:197566 | |||
LDLa | 3659..3693 | CDD:238060 | |||
LDLa | 3881..3912 | CDD:238060 | |||
LY | 4084..4125 | CDD:214531 | |||
LY | 4139..4181 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S4504 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.860 |