DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mld and ZNF282

DIOPT Version :10

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:XP_006716214.1 Gene:ZNF282 / 8427 HGNCID:13076 Length:672 Species:Homo sapiens


Alignment Length:497 Identity:121/497 - (24%)
Similarity:181/497 - (36%) Gaps:122/497 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1442 QRFHMTLKTDPSGAVKVEDVQLQ--------ITSERRPRGR--PYKPRLQLQQHQLQPQQKLQVQ 1496
            :.:...:..|..|:|...|..:|        :..:|.|..|  |..|  :.....|.|.|....|
Human   229 ENYKTLMSLDAEGSVPKPDAPVQAEPREEPCVWEQRHPEEREIPMDP--EAGAEPLVPAQDASSQ 291

  Fly  1497 QHQQQ------QKALQQLPQAQHHQQQQQPQLQQEVLQQVQQLQVQVQPQQHQQHQQVLQVQQPQ 1555
            ..::.      |:.|::............|...|::|.:::|          ::||.|...|...
Human   292 VKREDTLCVRGQRGLEERAIPTESITVDSPISAQDLLSRIKQ----------EEHQCVWDQQDLA 346

  Fly  1556 QQPLMQPQSPHPSTV------------EMQASPTTPRKILCCPDCE-DCTSGHSHANEQFEELQT 1607
            .:.:  |..|:..::            |.|..|..||..:   |.| ...||.|      :.|..
Human   347 DRDI--PTDPNSESLISAHDILSWIKQEEQPYPWGPRDSM---DGELGLDSGPS------DSLLM 400

  Fly  1608 LQAPPTVLTPPSTIVSVPSPQPMVYSQHITMPSPE-QSEPDSTTTLRQYRKRGVIVGPQGPLHLA 1671
            ::.||.  .||.     |.|||.       .|.|: ||:|.                ||.    .
Human   401 VKNPPP--APPQ-----PQPQPQ-------PPQPQLQSQPQ----------------PQS----L 431

  Fly  1672 TPVA-SPSPSSSPSSSTVDHIPPASPATPASPAPPP-----------------SPAVASTVQVSE 1718
            .|:| :.:|...||...:|......|....|...||                 ..|.|.|     
Human   432 PPIAVAENPGGPPSRGLLDDGFQVLPGERGSGEAPPGGDRSTGGGGGDGGGGGGGAEAGT----- 491

  Fly  1719 LRTSHHCLYCEERFTNEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPY 1783
             .....|..|...     .|:: ..|.||| .:.||.|..|.:.:.:|.:|..|..||..| |||
Human   492 -GAGGGCGSCCPG-----GLRR-SLLLHGA-RSKPYSCPECGKSFGVRKSLIIHHRSHTKE-RPY 547

  Fly  1784 ECNICRVRFPRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTHIKFH-GELGYQCDGCDRT 1847
            ||..|...|...|.|..|::| |...:|:.|.||.|.:..:..|:.|.:.| ||..:||..|.::
Human   548 ECAECEKSFNCHSGLIRHQMT-HRGERPYKCSECEKTYSRKEHLQNHQRLHTGERPFQCALCGKS 611

  Fly  1848 FEYLKELRKHRRTHS-EMFYKCKFCPSSFMRFTNFRAHMKTH 1888
            |...:.|.||:|.|: |..|.|..|..||....:.:.|::.|
Human   612 FIRKQNLLKHQRIHTGERPYTCGECGKSFRYKESLKDHLRVH 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
PAT1 <959..>1109 CDD:401645
C2H2 Zn finger 1365..1388 CDD:275368
C2H2 Zn finger 1396..1416 CDD:275368
C2H2 Zn finger 1424..1445 CDD:275368 0/2 (0%)
C2H2 Zn finger 1725..1746 CDD:275368 4/20 (20%)
C2H2 Zn finger 1756..1776 CDD:275368 5/19 (26%)
C2H2 Zn finger 1785..1806 CDD:275368 7/20 (35%)
zf-C2H2 1812..1834 CDD:395048 6/21 (29%)
C2H2 Zn finger 1814..1834 CDD:275368 6/19 (32%)
zf-C2H2 1839..1861 CDD:395048 8/21 (38%)
C2H2 Zn finger 1841..1861 CDD:275368 7/19 (37%)
zf-C2H2 1866..1888 CDD:395048 6/21 (29%)
C2H2 Zn finger 1868..1888 CDD:275368 5/19 (26%)
ZNF282XP_006716214.1 KRAB 198..260 CDD:214630 5/30 (17%)
COG5048 <507..652 CDD:227381 52/148 (35%)
C2H2 Zn finger 521..541 CDD:275368 5/19 (26%)
C2H2 Zn finger 549..569 CDD:275368 7/20 (35%)
C2H2 Zn finger 577..597 CDD:275368 6/19 (32%)
C2H2 Zn finger 605..625 CDD:275368 7/19 (37%)
C2H2 Zn finger 633..653 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.