DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and znf554

DIOPT Version :9

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_001072278.1 Gene:znf554 / 779731 XenbaseID:XB-GENE-5959179 Length:738 Species:Xenopus tropicalis


Alignment Length:1015 Identity:167/1015 - (16%)
Similarity:298/1015 - (29%) Gaps:386/1015 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   975 EMETQPSTVQMDVQSNLPVQAADTQPQ-------NESANHSPFESPI----SSPQVQSQIELQME 1028
            |:|.:...|.:|...:|.::.....|.       :||::....:...    ||.....::|. :|
 Frog    12 EVELKDGNVPLDESVSLRLENKQDLPAWHSLQFFDESSSDGSLDGDAVVSSSSDDENPEVEF-IE 75

  Fly  1029 PQIETQMQPQIETRMQHDVLSVQSPQNHQPQVQSHDQSQMQHQIPPQIEPQIEVQNQEQNTLQLV 1093
            |.::.:.:.|:..:::|..:|      .:||...|..:       |.||.|..:.:.|       
 Frog    76 PAVQIKSEEQVNQKIEHISIS------EEPQPGLHTDN-------PPIEDQAVLWSNE------- 120

  Fly  1094 PQAQHQVVPHVQLQSQLVPHVQTQGTTTTVTYEQIYQQHIVQQTVQQSSNKMQVISLPSAGSETT 1158
             ..|.||.|.|:   :||                     |.:.|.:::         |..|..:.
 Frog   121 -CVQEQVFPFVE---ELV---------------------IAEMTTEEN---------PELGPSSV 151

  Fly  1159 RQWQTQQSQQQQQVQWSSVGGLEAIKSAPVESVAPTTTTYYISASDLYPQQTE--------TYTM 1215
                   |.|..    |||...:|                   :|:::.|:.|        |:..
 Frog   152 -------SHQPS----SSVNVDDA-------------------SSEMFSQKEEIDSYVESNTFCS 186

  Fly  1216 LQPASNESYVIEQVNHQQQHCQQQIQ--MSQQQHQRQHQQQQAQQQQQPIMILIQQPEIQQPVAS 1278
            :..:......:...||....|.:|.:  ...::|                ..|.....:::.|:.
 Frog   187 VDTSKKSPGKLSIKNHNCPRCGRQFRRFSDLEKH----------------FCLKMVDFLKKSVSK 235

  Fly  1279 ASNPQQAPLHIYNAATSNDVHQMQHTQRQQIRQQYQHQQYQRLQQPQQTRVVQSHPVLG--MPGA 1341
            ..         |...:..|..:|    .:|:.::.|.:  .::.|......:::. :||  :..:
 Frog   236 GG---------YKKTSDYDSERM----LEQVCEKAQRE--LKIAQDMNEEEIRTF-ILGDTLDNS 284

  Fly  1342 TSISTKVTPIPVTAARGR------PLTLKCRFCHNGPRFSSSLEYSRHII-DLHPAVAPFNCP-- 1397
            :......:...||.::|:      ||...|..|  |.:|......::|.. ...|.:|  |.|  
 Frog   285 SDSEKGYSADKVTPSKGKSNKQTMPLQFNCDKC--GRQFGRLRNIAKHTCWGKDPNLA--NLPTG 345

  Fly  1398 ------HCP---MAFAGRT------------KRSQHILSHHVV----------QQYQCGQCSHVF 1431
                  |.|   .|.:|.|            |..|...:..::          :.|.|.||..||
 Frog   346 KAGSTEHVPKGKQASSGDTDQRPSTSQGQASKTPQRTPTGKIINNNYPPGTANKSYTCQQCGRVF 410

  Fly  1432 PAQKALDVHIQRFHMTLKTDPSGAVKVEDVQLQITSERRPRGRPYKPRLQLQQHQLQPQQKLQVQ 1496
            ....|...|| |:|                                    |::.:|:.:.|:..|
 Frog   411 ERSCAFSTHI-RWH------------------------------------LKESELELRAKIHDQ 438

  Fly  1497 QHQQQQKALQQLPQAQHHQQQQQPQLQQEVL-----------------QQVQQLQVQVQPQQHQQ 1544
            :....:||:..  :....|..::|.:..|.:                 ..|:.|      ..|..
 Frog   439 KVNLAKKAIAS--EGGSWQTMKKPVIGFEDVDLPFSCDECGRCFRHKGNLVKHL------NWHMS 495

  Fly  1545 HQQVLQVQQPQQQPL-MQPQSPHPSTVEMQASPTTPRKILCCPDCEDCTSGHSHANEQFEELQTL 1608
            |...:...:.:...| :.|  |.|...::|.:|                          :.|..:
 Frog   496 HNFHVAAMKEKNFGLGLYP--PEPYFPDLQYTP--------------------------DMLARM 532

  Fly  1609 QAPPTVLTPPSTIVSVPSPQPMVYSQHITMPSPEQSEPDSTTTLRQYRKRGVIVGPQGPLHLATP 1673
            |.....:.....|:.....:..|.|          |:|..||..:|   ||.....:|....:.|
 Frog   533 QEEDENVIGEDEIIHHFIDEDFVRS----------SDPKKTTREKQ---RGRSAAGKGDAQKSLP 584

  Fly  1674 VASPSPSSSPSSSTVDHIPPASPATPASPAPPPSPAVASTVQVSELRTSHHCLYCEERFTNEISL 1738
            .:.|.......|.              .|.||                 |.|..|..||.....|
 Frog   585 RSMPHAFMLRFSK--------------RPKPP-----------------HKCPDCGVRFFRLSQL 618

  Fly  1739 KKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQLTLHKI 1803
            |||.|.|.|                                                     .|:
 Frog   619 KKHQQRASG-----------------------------------------------------RKV 630

  Fly  1804 TVHLLSKPHTCDECGKQ-FGTESALKTHIKFHGELGYQCDGCDRTFEYLKELRKHRRTHSEMF-Y 1866
            |.   .:.|.|| |||. .|:...|:..::...:.|:.|:.|.:......:||.|...|..:. :
 Frog   631 TA---KRKHKCD-CGKSTVGSLHFLRHQLQHLSDTGFICEMCGQALCGYHQLRAHSWIHPLVSRF 691

  Fly  1867 KCKFCPSSFMRFTNFRAHMKTHLPLGVFRNEDAASKSPSN 1906
            :|. |.:.|.:...:..|       .:..|.|...|...|
 Frog   692 QCS-CGAKFSQLPRYLWH-------SLVNNTDIKKKEKKN 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
C2H2 Zn finger 1365..1388 CDD:275368 5/23 (22%)
C2H2 Zn finger 1396..1416 CDD:275368 8/42 (19%)
C2H2 Zn finger 1424..1445 CDD:275368 9/20 (45%)
C2H2 Zn finger 1725..1746 CDD:275368 9/20 (45%)
C2H2 Zn finger 1756..1776 CDD:275368 0/19 (0%)
C2H2 Zn finger 1785..1806 CDD:275368 2/20 (10%)
C2H2 Zn finger 1814..1834 CDD:275368 7/20 (35%)
zf-C2H2 1839..1861 CDD:278523 5/21 (24%)
C2H2 Zn finger 1841..1861 CDD:275368 5/19 (26%)
C2H2 Zn finger 1868..1888 CDD:275368 4/19 (21%)
znf554NP_001072278.1 C2H2 Zn finger 403..423 CDD:275368 9/20 (45%)
zf-C2H2 471..493 CDD:278523 2/27 (7%)
C2H2 Zn finger 473..493 CDD:275368 2/25 (8%)
C2H2 Zn finger 605..625 CDD:275368 9/19 (47%)
C2H2 Zn finger 638..657 CDD:275368 7/19 (37%)
C2H2 Zn finger 665..685 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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