DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and ZNF208

DIOPT Version :9

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_009084.2 Gene:ZNF208 / 7757 HGNCID:12999 Length:1280 Species:Homo sapiens


Alignment Length:610 Identity:132/610 - (21%)
Similarity:210/610 - (34%) Gaps:161/610 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1364 KCRFCHNGPRFSSSLEYSRHIIDLHPAVAPFNCPHCPMAFAGRTKRSQHILSHHVVQQYQCGQCS 1428
            ||..|  |..||:....::|.: :|....|:.|..|..|:...:..|.|...|.|.:.|:|.:|.
Human   722 KCEEC--GKSFSTFSVLTKHKV-IHTGEKPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECG 783

  Fly  1429 HVFPAQKALDVHIQRFHMTLKTDPSGAVKVEDVQLQITSERRPRGRPYKPRLQLQQHQLQPQQKL 1493
            ..|.....|..| :|.|                    |.|     :|||                
Human   784 KAFNRSAILIKH-KRIH--------------------TDE-----KPYK---------------- 806

  Fly  1494 QVQQHQQQQKALQQLPQAQHHQ---QQQQPQLQQEVLQQVQQLQVQVQPQQHQQHQQVLQVQQPQ 1555
                .::..|...::.....|:   ..::|...:|..:...:..:..      :|:.:...::|.
Human   807 ----CEECGKTFSKVSTLTTHKAIHAGEKPYKCKECGKAFSKFSILT------KHKVIHTGEKPY 861

  Fly  1556 QQPLMQPQSPHPSTVEMQASPTTPRKILCCP-DCEDCTSGHSHANEQFEELQTLQAPPTVLTPPS 1619
            :..........|||:.......|..|    | .||:|..|.|    .|          ::||...
Human   862 KCEECGKAYKWPSTLSYHKKIHTGEK----PYKCEECGKGFS----MF----------SILTKHE 908

  Fly  1620 TIVSVPSPQP-----------MVYSQHITMPSPEQ--------SEPDSTTTLRQYRKRGVIVGPQ 1665
            .|.:...|..           .|:|:|....:.|:        ....|::||..::|   |...:
Human   909 VIHTGEKPYKCEECGKAFSWLSVFSKHKKTHAGEKFYKCEACGKAYKSSSTLSYHKK---IHTEE 970

  Fly  1666 GPLHLATPVASPSPSSSPSSSTVDHIPPASPATPASPAPPPSPAVASTVQVSELRTSHHCLYCEE 1730
            .|..........|..|..:...|.|       |...|                    :.|..|.:
Human   971 KPYKYEECGKGFSTFSILTKHKVIH-------TGEKP--------------------YKCEECGK 1008

  Fly  1731 RFTNEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRP 1795
            .|....:|.:|.::..|   ..||.|..|.:.:...::|..|..:|..| :||:|..|...|..|
Human  1009 AFNWSSNLMEHKKIHTG---ETPYKCEECDKAFSWPSSLTEHKATHAGE-KPYKCEECGKAFSWP 1069

  Fly  1796 SQLTLHKIT---------------------------VHLLSKPHTCDECGKQFGTESALKTHIKF 1833
            |:||.||.|                           :|...||:.|:||||.|.|.|.|..|...
Human  1070 SRLTEHKATHAGEEPYKCEECGKAFNWSSNLMEHKRIHTGEKPYKCEECGKSFSTFSILTKHKVI 1134

  Fly  1834 H-GELGYQCDGCDRTFEYLKELRKHRRTHS-EMFYKCKFCPSSFMRFTNFRAHMKTHLPLGVFRN 1896
            | ||..|:|:.|.:.:::...|..|::.|: |..|||:.|...|:.|:....|...|....:::.
Human  1135 HTGEKPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKGFVMFSILAKHKVIHTGEKLYKC 1199

  Fly  1897 EDA--ASKSPSNNNSHASSDKLENP 1919
            |:.  |.|.||....|......|.|
Human  1200 EECGKAYKWPSTLRYHKKIHTGEKP 1224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
C2H2 Zn finger 1365..1388 CDD:275368 6/22 (27%)
C2H2 Zn finger 1396..1416 CDD:275368 5/19 (26%)
C2H2 Zn finger 1424..1445 CDD:275368 6/20 (30%)
C2H2 Zn finger 1725..1746 CDD:275368 5/20 (25%)
C2H2 Zn finger 1756..1776 CDD:275368 4/19 (21%)
C2H2 Zn finger 1785..1806 CDD:275368 10/47 (21%)
C2H2 Zn finger 1814..1834 CDD:275368 10/19 (53%)
zf-C2H2 1839..1861 CDD:278523 5/21 (24%)
C2H2 Zn finger 1841..1861 CDD:275368 4/19 (21%)
C2H2 Zn finger 1868..1888 CDD:275368 5/19 (26%)
ZNF208NP_009084.2 KRAB 4..64 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 175..195 CDD:275368
C2H2 Zn finger 203..223 CDD:275368
COG5048 227..619 CDD:227381
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 259..279 CDD:275368
C2H2 Zn finger 287..307 CDD:275368
C2H2 Zn finger 315..335 CDD:275368
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
zf-H2C2_2 384..407 CDD:290200
C2H2 Zn finger 399..419 CDD:275368
C2H2 Zn finger 427..447 CDD:275368
zf-H2C2_2 439..463 CDD:290200
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 499..519 CDD:275368
zf-H2C2_2 511..536 CDD:290200
C2H2 Zn finger 527..547 CDD:275368
C2H2 Zn finger 555..575 CDD:275368
zf-H2C2_2 568..592 CDD:290200
C2H2 Zn finger 583..603 CDD:275368
zf-H2C2_2 596..619 CDD:290200
C2H2 Zn finger 611..631 CDD:275368
C2H2 Zn finger 639..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
COG5048 691..1133 CDD:227381 106/517 (21%)
C2H2 Zn finger 695..715 CDD:275368
zf-H2C2_2 707..732 CDD:290200 5/11 (45%)
C2H2 Zn finger 723..743 CDD:275368 6/22 (27%)
C2H2 Zn finger 751..771 CDD:275368 5/19 (26%)
zf-H2C2_2 764..788 CDD:290200 8/23 (35%)
C2H2 Zn finger 779..799 CDD:275368 6/20 (30%)
C2H2 Zn finger 807..827 CDD:275368 2/19 (11%)
C2H2 Zn finger 835..855 CDD:275368 2/25 (8%)
C2H2 Zn finger 863..883 CDD:275368 3/19 (16%)
zf-H2C2_2 876..899 CDD:290200 7/26 (27%)
C2H2 Zn finger 891..911 CDD:275368 8/33 (24%)
C2H2 Zn finger 919..939 CDD:275368 3/19 (16%)
C2H2 Zn finger 947..967 CDD:275368 4/22 (18%)
C2H2 Zn finger 976..995 CDD:275368 3/18 (17%)
C2H2 Zn finger 1003..1023 CDD:275368 5/19 (26%)
zf-H2C2_2 1015..1039 CDD:290200 7/26 (27%)
C2H2 Zn finger 1031..1051 CDD:275368 4/19 (21%)
C2H2 Zn finger 1059..1079 CDD:275368 9/19 (47%)
C2H2 Zn finger 1087..1107 CDD:275368 0/19 (0%)
zf-H2C2_2 1099..1124 CDD:290200 9/24 (38%)
C2H2 Zn finger 1115..1135 CDD:275368 10/19 (53%)
C2H2 Zn finger 1143..1163 CDD:275368 4/19 (21%)
C2H2 Zn finger 1171..1191 CDD:275368 5/19 (26%)
C2H2 Zn finger 1199..1219 CDD:275368 6/19 (32%)
zf-H2C2_2 1212..1236 CDD:290200 3/13 (23%)
C2H2 Zn finger 1227..1247 CDD:275368
C2H2 Zn finger 1255..1275 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142325
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.030

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