DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mld and Zfp688

DIOPT Version :9

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_081275.3 Gene:Zfp688 / 69234 MGIID:1916484 Length:274 Species:Mus musculus


Alignment Length:203 Identity:45/203 - (22%)
Similarity:68/203 - (33%) Gaps:67/203 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1625 PSPQPMVYS---QHITMPSPEQSEPDSTTTLRQYRKRGVIVGPQGPLHLAT----PVASPSPSSS 1682
            |.|:|.:.|   |.....||...:|:...:|..        .|:|.:...|    ......|:.:
Mouse    68 PGPKPALISWMEQGSEAWSPAAQDPEEGESLGG--------APRGDIPNETEWGCKEGGERPAEA 124

  Fly  1683 PS----SSTVDHIPPASPATPASPAPPPSPA-------------VAST-VQVSELRTSHHCLYCE 1729
            |:    ...|:|...:.....::.|.||:.|             |.:| :|.|:.|  |.|:.|.
Mouse   125 PAQLQPKEVVEHKTYSMATKSSAGAQPPTKAAPDQIAGVQLPVQVPNTDIQASQRR--HVCVDCG 187

  Fly  1730 ERFTNEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPR 1794
            .|||                             |......||.|.|.:   ||:.|..|.|||.|
Mouse   188 RRFT-----------------------------YPSLLVSHRRMHSGE---RPFPCPECGVRFKR 220

  Fly  1795 PSQLTLHK 1802
            ...:..|:
Mouse   221 KFAVKAHQ 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
C2H2 Zn finger 1365..1388 CDD:275368
C2H2 Zn finger 1396..1416 CDD:275368
C2H2 Zn finger 1424..1445 CDD:275368
C2H2 Zn finger 1725..1746 CDD:275368 5/20 (25%)
C2H2 Zn finger 1756..1776 CDD:275368 4/19 (21%)
C2H2 Zn finger 1785..1806 CDD:275368 7/18 (39%)
C2H2 Zn finger 1814..1834 CDD:275368
zf-C2H2 1839..1861 CDD:278523
C2H2 Zn finger 1841..1861 CDD:275368
C2H2 Zn finger 1868..1888 CDD:275368
Zfp688NP_081275.3 KRAB 26..86 CDD:214630 5/17 (29%)
KRAB 26..65 CDD:279668
COG5048 <166..>233 CDD:227381 25/97 (26%)
zf-C2H2 181..203 CDD:278523 9/50 (18%)
C2H2 Zn finger 183..203 CDD:275368 8/48 (17%)
zf-H2C2_2 196..220 CDD:290200 11/26 (42%)
C2H2 Zn finger 211..231 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832268
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.