DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and ZNF107

DIOPT Version :9

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_001374954.1 Gene:ZNF107 / 51427 HGNCID:12887 Length:896 Species:Homo sapiens


Alignment Length:557 Identity:118/557 - (21%)
Similarity:180/557 - (32%) Gaps:194/557 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1373 RFSSSLEYSRHIIDLHPAVAPFNCPHCPMAFAGRTKRSQHILSHHVVQQYQCGQCSHVFPAQKAL 1437
            :||:|..|.|.    |.....|.|..|..:|...::.:||...|..|..|:|.:|...|.....|
Human   200 KFSNSNRYKRR----H
TGNKHFKCKECSKSFCVLSQLTQHRRIHTRVNSYKCEECGKAFNWFSTL 260

  Fly  1438 DVHIQRFHMTLKTDPSGAVKVEDVQLQITSERRPRGRPYKPRLQLQQHQLQPQQKLQVQQHQQQQ 1502
            ..| :|.|                    |.|     :|||                    .::..
Human   261 TKH-KRIH--------------------TGE-----KPYK--------------------CEECG 279

  Fly  1503 KALQQLPQAQHHQ---QQQQPQLQQEVLQQVQQLQVQVQPQQHQQHQQVLQVQQPQQQPLMQPQS 1564
            ||..|..|...|:   .:::|...:|..:..:|          ..|..:.::....::|....:.
Human   280 KAFNQSSQLTRHKIIHTEEKPNKCEECGKAFKQ----------ASHLTIHKIIHTGEKPYKYEEC 334

  Fly  1565 PHPSTVEMQASPTTPRKILCCPD----CEDCTSGHSHANEQFEELQTLQAPPTVLTPPSTIVSVP 1625
               ..|..|:|..|.:|||...:    |::|    ..|...|..|                    
Human   335 ---GKVFSQSSHLTTQKILHTGENLYKCKEC----GKAFNLFSNL-------------------- 372

  Fly  1626 SPQPMVYSQHITMPSPEQSEPDSTTTLRQYRKRGVIVGPQGPLHLATPVASPSPSSSPSSSTVDH 1690
                   :.|                     ||         :|     |...|..........:
Human   373 -------TNH---------------------KR---------IH-----AGEKPYKCKECGRAFN 395

  Fly  1691 IPPASPATPASPAPPPSPAVASTVQVSE-LRTS---HHCLYCEERFTNEISLKKHHQLAHGALTT 1751
            |                   :|.:...| :.|.   :.|..|::.|...:.|..|.::   .:..
Human   396 I-------------------SSNLNKQEKIHTGGKLNKCEECDKAFNRSLKLTAHKKI---LMEE 438

  Fly  1752 MPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQLTLHKITVHLL-------- 1808
            .||.|..|.:.:...:.|.||...|..| :||:|..|...|.:.|.||.|| .:|..        
Human   439 KPYKCEECGKVFNQFSTLTRHKIIHTGE-KPYKCKECGKAFNQSSNLTEHK-KIHTAEKSYKCEE 501

  Fly  1809 --------------------SKPHTCDECGKQFGTESALKTHIKFH-GELGYQCDGCDRTFEYLK 1852
                                .||:.|:||||.|...|.|..|.|.| ||..|:|:.|||.|....
Human   502 CGKAFNQHSNLINHRKIYSGEKPYKCEECGKAFNRSSTLTRHKKIHTGEKPYKCEECDRAFSQSS 566

  Fly  1853 ELRKHRRTHS-EMFYKCKFCPSSFMRFTNFRAHMKTH 1888
            .|.:|::.|: |..|||:.|..:|.||:....|.:.|
Human   567 NLTEHKKIHTGEKPYKCEECGKAFNRFSTLTKHKRIH 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
C2H2 Zn finger 1365..1388 CDD:275368 5/14 (36%)
C2H2 Zn finger 1396..1416 CDD:275368 5/19 (26%)
C2H2 Zn finger 1424..1445 CDD:275368 6/20 (30%)
C2H2 Zn finger 1725..1746 CDD:275368 5/20 (25%)
C2H2 Zn finger 1756..1776 CDD:275368 5/19 (26%)
C2H2 Zn finger 1785..1806 CDD:275368 8/20 (40%)
C2H2 Zn finger 1814..1834 CDD:275368 10/19 (53%)
zf-C2H2 1839..1861 CDD:278523 8/21 (38%)
C2H2 Zn finger 1841..1861 CDD:275368 7/19 (37%)
C2H2 Zn finger 1868..1888 CDD:275368 6/19 (32%)
ZNF107NP_001374954.1 KRAB 48..108 CDD:214630
C2H2 Zn finger 191..211 CDD:275368 5/14 (36%)
C2H2 Zn finger 219..239 CDD:275368 5/19 (26%)
COG5048 243..621 CDD:227381 104/510 (20%)
C2H2 Zn finger 247..267 CDD:275368 6/20 (30%)
C2H2 Zn finger 275..295 CDD:275368 5/19 (26%)
C2H2 Zn finger 303..323 CDD:275368 3/29 (10%)
C2H2 Zn finger 331..351 CDD:275368 6/22 (27%)
C2H2 Zn finger 359..379 CDD:275368 8/80 (10%)
C2H2 Zn finger 387..407 CDD:275368 3/38 (8%)
C2H2 Zn finger 415..435 CDD:275368 5/22 (23%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
C2H2 Zn finger 471..491 CDD:275368 8/20 (40%)
C2H2 Zn finger 499..519 CDD:275368 0/19 (0%)
C2H2 Zn finger 527..547 CDD:275368 10/19 (53%)
COG5048 551..>863 CDD:227381 19/53 (36%)
C2H2 Zn finger 555..575 CDD:275368 7/19 (37%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368
C2H2 Zn finger 639..659 CDD:275368
C2H2 Zn finger 699..715 CDD:275368
C2H2 Zn finger 723..743 CDD:275368
C2H2 Zn finger 751..771 CDD:275368
C2H2 Zn finger 779..799 CDD:275368
C2H2 Zn finger 807..827 CDD:275368
C2H2 Zn finger 835..855 CDD:275368
C2H2 Zn finger 863..883 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142192
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.030

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