DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and znf574

DIOPT Version :9

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_001004843.1 Gene:znf574 / 448126 XenbaseID:XB-GENE-1004140 Length:857 Species:Xenopus tropicalis


Alignment Length:822 Identity:181/822 - (22%)
Similarity:277/822 - (33%) Gaps:233/822 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1196 TTYYISASDLYPQQTETYTMLQPASNESYVIEQVNHQQQHC------QQQI---QMSQQQHQ--- 1248
            |..|:....:..:..|.|..|:         |.:.|||.|.      |.||   ...:.|:|   
 Frog     7 TVLYVEHRYVCSECGEEYPSLE---------EALEHQQSHAAALQEPQYQIVGVNSLENQYQCLE 62

  Fly  1249 -----RQHQQQQAQQQQQPIMILIQQPEIQQPVASASNPQQAPLH--------IYNAATSNDVHQ 1300
                 |..:...|.|:..|     .|.|||:|    ..|.::.:|        ::|   |.|| .
 Frog    63 CGLLLRTPEDLLAHQELHP-----TQNEIQKP----KRPTRSEIHYECPECKALFN---SQDV-W 114

  Fly  1301 MQHTQRQQIRQQYQHQQYQRLQQPQQTRVVQSHPVLGMPGATSISTKVTPIPVTAARGRPLTLKC 1365
            |.|        :|.|.|.|.:...:.......|.:  ..|...:.....|..|....|.|     
 Frog   115 MAH--------RYTHMQVQDVSHSKIVLQTDDHVI--EDGLQLMCAPAVPSEVHLVTGDP----- 164

  Fly  1366 RFCHNGPRFSSSLEYSRHIIDLHPAVAPFNCPHCPMAFAGRTKRSQHILSHHVVQQYQCGQCSHV 1430
             ..|.....|:|:.:::.::||..:       :.....||.....:.:|       |:|.:|:.:
 Frog   165 -HFHVSTPSSASVSHTQVLVDLEHS-------YKKNEGAGEDCAMELLL-------YKCSECTQL 214

  Fly  1431 FPAQKALDVHIQRFHMTLKTDPSGAVKVEDVQLQITSERRPRGRPYKPRLQLQQHQLQP--QQKL 1493
            |........| |..|.      ||..::.|....:..         .|:|.|...:.:|  .|..
 Frog   215 FQTPGEFLEH-QGTHF------SGQERISDTNSHLDQ---------TPQLSLNGQEKEPIINQGN 263

  Fly  1494 QVQQHQQQQKALQQLPQAQHHQQ-----QQQPQLQ----QEVLQQVQQLQVQVQPQQHQ-QHQQV 1548
            ....:|.:.|.|...|:.:..:|     .::|...    .|..|..:.|      ::|| .||  
 Frog   264 TCTDYQAENKELLVQPEGEQAEQDSWTVDREPVFSCGDCSETFQTTKDL------EEHQISHQ-- 320

  Fly  1549 LQVQQPQQQPLMQPQSP-HPSTVEMQASPTTPRKILCCPDC------EDCTSGH--SH-ANEQFE 1603
               ..|...||.....| :|...|...|..:..:.||. ||      |.....|  || ||..| 
 Frog   321 ---NGPFSCPLCSKVFPTYPEVGEHLKSHRSESRYLCV-DCGLAFVSEAVLLNHRRSHLANPLF- 380

  Fly  1604 ELQTLQAPPTVLTPPSTIVSVPSPQPMVYSQHITMPSPEQSEPDSTTTLRQYRKRGVIVGPQGPL 1668
               |.:...|.|                                 ..|...|.:|         :
 Frog   381 ---TCECGLTFL---------------------------------NMTRFLYHRR---------V 400

  Fly  1669 HLATPVASPSPSSSPSSSTVDHIPPASPA--TPASPAPPPSPAVASTVQ----VSELRTSHHCLY 1727
            |.:   ..|...:.....||:.|.| |||  ....|.....|.::..::    |..|...|.|..
 Frog   401 HSS---KQPDTGAVEEKKTVNSIAP-SPAGNFHCDPCGKDFPLLSQFLRHQRFVHALERRHKCPT 461

  Fly  1728 CEERFTNEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRF 1792
            |.:.|.....|:. |.|.|..  ..||.||:|.:.:..:..|.||..:|..| :||:|.:|...|
 Frog   462 CGKHFKKGSHLRT-HMLTHTG--ERPYSCTVCSKSFNSQANLLRHRLTHTGE-KPYKCQLCGKAF 522

  Fly  1793 PRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTHIKFH-GELGYQCDGCDRTFEYLKELRK 1856
            .:.|.|..|:. ||..:..:.|:|||..|.....|..|...| ||..|:|..|..:|...:.|..
 Frog   523 SQSSTLQQHQY-VHGQAYLYKCNECGINFHRPYRLLLHQYHHTGEYPYKCQDCGLSFLLKRLLEV 586

  Fly  1857 HRRTH-SEMFYKCKFCPSSF---MRFTNFR------------------------AHMKTHLPLGV 1893
            |:..| .|..::|:.|.::|   .|..:.|                        ||:.||:    
 Frog   587 HQLGHRGEEPHRCRECGTNFPSVQRLQDHRCSKAGDGGGEKLECPICGKKVTSDAHLNTHV---- 647

  Fly  1894 FRNEDAASKSPSNNNSHASSDKLENPATPIEETPLTPMSSGG 1935
                  |::...|..|:.||.|    .||:  .|...:..||
 Frog   648 ------AAQHSGNKRSNVSSGK----GTPV--LPRNKLKGGG 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
C2H2 Zn finger 1365..1388 CDD:275368 4/22 (18%)
C2H2 Zn finger 1396..1416 CDD:275368 3/19 (16%)
C2H2 Zn finger 1424..1445 CDD:275368 5/20 (25%)
C2H2 Zn finger 1725..1746 CDD:275368 6/20 (30%)
C2H2 Zn finger 1756..1776 CDD:275368 6/19 (32%)
C2H2 Zn finger 1785..1806 CDD:275368 6/20 (30%)
C2H2 Zn finger 1814..1834 CDD:275368 7/19 (37%)
zf-C2H2 1839..1861 CDD:278523 6/21 (29%)
C2H2 Zn finger 1841..1861 CDD:275368 5/19 (26%)
C2H2 Zn finger 1868..1888 CDD:275368 7/46 (15%)
znf574NP_001004843.1 C2H2 Zn finger 17..37 CDD:275368 7/28 (25%)
C2H2 Zn finger 60..80 CDD:275368 3/19 (16%)
zf-C2H2_6 98..124 CDD:372808 9/37 (24%)
C2H2 Zn finger 101..121 CDD:275368 7/31 (23%)
C2H2 Zn finger 299..319 CDD:275368 5/25 (20%)
C2H2 Zn finger 326..346 CDD:275368 5/19 (26%)
C2H2 Zn finger 354..374 CDD:275368 5/20 (25%)
C2H2 Zn finger 382..401 CDD:275368 5/60 (8%)
C2H2 Zn finger 430..451 CDD:275368 2/20 (10%)
COG5048 457..>768 CDD:227381 66/242 (27%)
C2H2 Zn finger 459..479 CDD:275368 6/20 (30%)
zf-H2C2_2 471..496 CDD:372612 9/27 (33%)
C2H2 Zn finger 487..507 CDD:275368 6/19 (32%)
C2H2 Zn finger 515..535 CDD:275368 6/20 (30%)
C2H2 Zn finger 543..563 CDD:275368 7/19 (37%)
C2H2 Zn finger 571..591 CDD:275368 5/19 (26%)
C2H2 Zn finger 599..616 CDD:275368 4/16 (25%)
C2H2 Zn finger 630..651 CDD:275368 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 648..678 11/36 (31%)
C2H2 Zn finger 683..703 CDD:275368
C2H2 Zn finger 711..731 CDD:275368
zf-H2C2_2 723..747 CDD:372612
C2H2 Zn finger 739..759 CDD:275368
C2H2 Zn finger 767..787 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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