DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and indra

DIOPT Version :10

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_728599.1 Gene:indra / 38159 FlyBaseID:FBgn0035213 Length:733 Species:Drosophila melanogaster


Alignment Length:487 Identity:93/487 - (19%)
Similarity:160/487 - (32%) Gaps:159/487 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1569 TVEMQASPTT-PRKILCCPDCEDCTSGHSHANEQFEELQTLQAPPTVLTPPSTIVSVPSPQPMVY 1632
            |:..::.|:: |.||     |..|||             |..:...::......|.....||...
  Fly    49 TITHRSIPSSLPIKI-----CFVCTS-------------TFMSSAALIEKVRETVDRVQEQPAKK 95

  Fly  1633 SQ--HITMPSPEQSE------PDSTTTLRQYRKRGVIVGPQGPLHLA---TPV----ASP----- 1677
            ::  .|..||.::|:      |...||||| |.:.:...|...::.|   |.:    |||     
  Fly    96 TKVAEIEEPSTQESDKKAVKVPKKNTTLRQ-RSKSIAAFPPSFVNGANTNTEIEIISASPKKLDK 159

  Fly  1678 SPSSSPSSSTVDHIPPASPATPASPAPPPSPAVAS--------TVQV---SE-----------LR 1720
            :|....|....|::..:...|||........|..:        .::|   ||           :.
  Fly   160 TPKKQISRLFEDNLNDSVKLTPAKEVSSTKKAFLNLFGNGGNDAIEVLTESEEEEDSDKGPITIN 224

  Fly  1721 TSH-HCLYCEERFTNEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHM-ESHD------ 1777
            |:: .|..||.........|:|.|..||......|.||:|.:.:.:...|..|: ::|.      
  Fly   225 TNNFQCPECEFHAKFPKPYKEHLQKEHGLQRPRIYPCTLCIKTFGVLKTLKNHLRDTHSRTFESE 289

  Fly  1778 --------------------VEGRPYECN-ICRVRFPRPSQLTLHKITVHLLSKPHTCDECGKQF 1821
                                ::.:..|.| :.:.:.|:..:....|..:....:....||...|.
  Fly   290 AKTKAKESKEKEAKSGAKNKIDAKAKETNAVSQRKKPKEKKSKEKKTEIKCNVETKVVDEIDDQV 354

  Fly  1822 ----GT--------------------ESALKTHI-----------KFHGEL---------GYQCD 1842
                ||                    ||.:|..:           ..:|..         .:||:
  Fly   355 NNKKGTDSEDADQTQATKIASFKALNESLMKKRMLENVIDSEYTFAINGSSASTPRADSNNFQCE 419

  Fly  1843 GCDRTFEYLKELRKHRRT-HS---EMFYKCKFCPSSFMRFTNFRAHMKTHLPLGVFRNEDAASKS 1903
            .||......|::::|.:| ||   ...:||..|..|.....:.:.||..|        .|.| ::
  Fly   420 ICDCELMTAKQMQEHMKTVHSIDKPKVFKCHVCEKSLATKQSLKTHMTLH--------ADGA-EA 475

  Fly  1904 PSNNNSHASSD-----------KLENPATPIE 1924
            |:::......|           ::||.|..:|
  Fly   476 PNSSKRKILQDEDEDVDILGTTQIENTAEKVE 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
PAT1 <959..>1109 CDD:401645
C2H2 Zn finger 1365..1388 CDD:275368
C2H2 Zn finger 1396..1416 CDD:275368
C2H2 Zn finger 1424..1445 CDD:275368
C2H2 Zn finger 1725..1746 CDD:275368 6/20 (30%)
C2H2 Zn finger 1756..1776 CDD:275368 5/20 (25%)
C2H2 Zn finger 1785..1806 CDD:275368 3/21 (14%)
zf-C2H2 1812..1834 CDD:395048 8/56 (14%)
C2H2 Zn finger 1814..1834 CDD:275368 8/54 (15%)
zf-C2H2 1839..1861 CDD:395048 7/22 (32%)
C2H2 Zn finger 1841..1861 CDD:275368 6/20 (30%)
zf-C2H2 1866..1888 CDD:395048 6/21 (29%)
C2H2 Zn finger 1868..1888 CDD:275368 5/19 (26%)
indraNP_728599.1 SUF4-like 418..499 CDD:411020 19/89 (21%)
C2H2 Zn finger 418..439 CDD:411020 6/20 (30%)
C2H2 Zn finger 418..439 CDD:275370 6/20 (30%)
C2H2 Zn finger 449..469 CDD:411020 5/19 (26%)
C2H2 Zn finger 449..469 CDD:275370 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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