DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and CG30020

DIOPT Version :9

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster


Alignment Length:1297 Identity:242/1297 - (18%)
Similarity:413/1297 - (31%) Gaps:380/1297 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   793 PTPMDFMAEFAKHCANGIEQLKVTTPVPSPTPSDLV---------PLNDLEAKQKLEVEMNDVET 848
            |.|.:  .|....|.  :|.:::..|... .|.|.|         .|.|::  .:|.|.|::...
  Fly   208 PAPKE--EEVKAVCT--LEDMELLIPTVL-RPEDYVQPHPHIDNDQLRDID--HQLAVSMDEPVP 265

  Fly   849 TLNGILNEMQDQHMYTPNCAHIDEFLTPADYATLTEQESSV------SSPPNPFEQSSVAEPKDE 907
            :::.:.:.:..  |.|||.:...|:|...|.:......|.|      .|.||  ..|:|......
  Fly   266 SVDSLTSTLPP--MDTPNVSIGTEYLVLPDGSLQQVNGSGVVIEYIDDSKPN--SSSNVNVSLQN 326

  Fly   908 KPSATEDPFDNSNFTNELIGFQNDIPCFENIETPEEGQNLHLELTQFLRDLQPSQSDPPA--GEQ 970
            ..|:..||.|..  .||||           :|          |:...:| ::|.    ||  |..
  Fly   327 LLSSHNDPMDID--VNELI-----------VE----------EMMPQIR-IKPK----PAVIGTS 363

  Fly   971 VEKIEMETQPSTVQMDVQ--------SNLP-----------VQAADTQPQNESANHSPFESPISS 1016
            :.|.:.:..|.|.....:        ||||           :::||.....:..:|...|:..:.
  Fly   364 IHKHKCKFCPKTFSTVARLKSHQLTHSNLPKFFCDQCDFYSLRSADLIQHYKMVHHRVDENGKTG 428

  Fly  1017 PQVQSQIELQMEP----QIETQMQPQIET--RMQHDV------------------LSVQSPQNHQ 1057
            .:....||.::..    ..||....|:.|  :.:|.|                  ..|.:.|...
  Fly   429 KEQAQGIESRVYSCDMCLFETSTVSQLRTHYKERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQTP 493

  Fly  1058 PQVQSHDQSQMQHQIPPQIEPQIEVQNQEQNTLQLVPQ-AQHQVVPHVQLQSQLVPHVQTQGTTT 1121
            .::.:|....:..:.||.:   :|.|..       :|| ..||.:|.        |..||:...|
  Fly   494 AKILNHTDIPLGIKYPPGV---LETQAP-------LPQPVVHQPMPD--------PMQQTEPMAT 540

  Fly  1122 TVTYEQIYQQHIVQQTVQQSSNKMQVISLPSAGSETTRQWQTQQSQQQQQVQWSSVGGLEAIKSA 1186
            |.|            |:.:|.:...|:       :.|..:....|           ..|.....|
  Fly   541 TST------------TITESGDINVVV-------DATPLFYAATS-----------NSLLVTNPA 575

  Fly  1187 PVESVAPTTTTYYISASDLYPQQTE----TYTMLQPASNESYVIEQVNHQQQHCQ---------- 1237
            ||.:|..||.|....|..::|:.:|    ....:|.|...|..:......|....          
  Fly   576 PVTTVEETTGTASNHAFGIFPEISEGNLPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTI 640

  Fly  1238 ----------QQIQMSQQQHQRQHQQQ---QAQQQQQPIMILIQQPEIQQPVASASNPQQAPLHI 1289
                      ..|.:...........:   :..::::...:..::.|......:.:|......::
  Fly   641 PADGMPVVDGDDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNL 705

  Fly  1290 YNAATSNDVHQMQHTQRQQIRQQYQHQQYQRLQQPQQTRVVQSHPVLGMPGATSISTKVTPIPVT 1354
            ...:..:||            ..:..:|.:.||:|.                             
  Fly   706 LLTSDDDDV------------DDFDDEQSKHLQKPY----------------------------- 729

  Fly  1355 AARGRPLTLKCRFCHNGPRFSSSLEYSRHIIDLHPAVAPFNCPHCPMAFAGRTKRSQHILSHHVV 1419
                      |.:|:.  :|:|..::..|:. :|..:||                          
  Fly   730 ----------CIYCNK--KFTSQYKFENHMF-VHRGLAP-------------------------- 755

  Fly  1420 QQYQCGQCSHVFPAQKALDVHIQRFHMTLKTDPSGAVKVEDVQLQITS-ERRPRGRPYKPRLQLQ 1483
              |:|..|::::..::.|..|.:..|..:.|......|.:.|.:..|: |:...||...|.|...
  Fly   756 --YRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKLYPGRIKNPMLMCA 818

  Fly  1484 QHQLQPQQKLQVQQHQQQQKALQQLPQAQHHQQQQQPQLQQEVLQQVQQLQVQVQPQQHQQHQQV 1548
            :...:.:...::::|......:........::.....:|..|..:.::....:....:|.|...:
  Fly   819 KCPFECESDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHL 883

  Fly  1549 LQVQQPQQQPLMQPQSPH---PSTVEMQASPTT---PRKILCCP-----------DCEDCTS--G 1594
            :..       :::.|:||   ..|..|..|.:|   |...:...           ..|..|.  |
  Fly   884 VDT-------IIEMQTPHCGEAITTTMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALG 941

  Fly  1595 HSHANEQ----------------FEELQ--TLQAPPTVLT--------------------PPSTI 1621
            :...||:                .|||.  ||.|...|.|                    |.:|.
  Fly   942 NGDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATT 1006

  Fly  1622 VS-----VPSPQPMVYSQHITMPSPEQSEPDSTTTLRQYRKRGVIVGPQGPLHLATPVASPSPSS 1681
            .|     .|:|.|..:...|.....:||.|:                    :|..:...|.:.||
  Fly  1007 ASSSTTLFPTPTPFDFDYDIMRDEAQQSSPN--------------------IHDVSKALSDNASS 1051

  Fly  1682 S-PSSSTVDHIPPASPATPASPAPPPSPAVASTVQVSELRTS--HHCLYCEERFTNEISLKKHHQ 1743
            | |.:.:...:  ::.|...|||    ..:.|.   |.|..|  |.|..|.:.|.....|.||..
  Fly  1052 SCPINESYKLL--STTALETSPA----KGLRSN---SRLHRSSIHICKLCNQTFDELGKLVKHEM 1107

  Fly  1744 LAHG----ALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQLTLHKIT 1804
            ..|.    :.....:.|.||...||..|.|..||:.|  ..|..:|.:|...|...::|..|...
  Fly  1108 ELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRH--SNRKSQCKLCPKSFVTIAELERHTKA 1170

  Fly  1805 VHLLSKPHTC--DECGKQFGTESALKTHIK-FHGELGYQCDGCDRTFEYLKELRKHRRTH-SEMF 1865
            .|...|...|  |.|.|.|..:..|..|.| .|....|.|..|::..:....|:.|...| .|:.
  Fly  1171 KHSKDKTLRCFMDGCRKTFAFKHHLIRHQKASHLSTRYICPVCNKEEKSNVHLKNHMSVHKGEIT 1235

  Fly  1866 YKCKFCPSSFMRFTNFRAHMKTHLPLGV----FRNEDAASKSPSNNNSHASSDKLENPATPI 1923
            |||..|..|::|    |..:.|| .|.:    |..|:..:.|....|....:|.  ..|||:
  Fly  1236 YKCPKCDRSYLR----RGRLVTH-ALIIHDLRFTTEELGNLSSLATNQARPNDL--KVATPV 1290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
C2H2 Zn finger 1365..1388 CDD:275368 5/22 (23%)
C2H2 Zn finger 1396..1416 CDD:275368 0/19 (0%)
C2H2 Zn finger 1424..1445 CDD:275368 4/20 (20%)
C2H2 Zn finger 1725..1746 CDD:275368 6/20 (30%)
C2H2 Zn finger 1756..1776 CDD:275368 9/19 (47%)
C2H2 Zn finger 1785..1806 CDD:275368 5/20 (25%)
C2H2 Zn finger 1814..1834 CDD:275368 8/22 (36%)
zf-C2H2 1839..1861 CDD:278523 5/21 (24%)
C2H2 Zn finger 1841..1861 CDD:275368 4/19 (21%)
C2H2 Zn finger 1868..1888 CDD:275368 5/19 (26%)
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368 2/19 (11%)
C2H2 Zn finger 397..418 CDD:275368 2/20 (10%)
C2H2 Zn finger 442..460 CDD:275368 4/17 (24%)
C2H2 Zn finger 730..750 CDD:275368 5/22 (23%)
C2H2 Zn finger 758..777 CDD:275368 4/18 (22%)
C2H2 Zn finger 1089..1110 CDD:275368 6/20 (30%)
C2H2 Zn finger 1124..1144 CDD:275368 9/19 (47%)
C2H2 Zn finger 1151..1172 CDD:275368 5/20 (25%)
C2H2 Zn finger 1180..1203 CDD:275368 8/22 (36%)
C2H2 Zn finger 1210..1230 CDD:275368 4/19 (21%)
C2H2 Zn finger 1238..1254 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439979
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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