DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mld and zgc:66472

DIOPT Version :10

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_956106.2 Gene:zgc:66472 / 327494 ZFINID:ZDB-GENE-030131-5705 Length:556 Species:Danio rerio


Alignment Length:292 Identity:68/292 - (23%)
Similarity:114/292 - (39%) Gaps:53/292 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1684 SSSTVDHIPPASPA--------TPASPAPPPSPAVASTVQVSE-LRTSHHCLYCEERFTNEIS-- 1737
            :|::|| ....||.        ..::|..|....|:..::..: |....|||.|.....|:.|  
Zfish   187 ASASVD-FQTTSPKVKEMKKENVTSTPTHPNDANVSRGLRDRQHLGMQRHCLCCSSDECNKQSSP 250

  Fly  1738 LKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQLTLHK 1802
            .|..||:      ...|:|..|:|  |.:|.|  ..:||.. ..|..|:.|...|.....|..|:
Zfish   251 SKAQHQV------PTVYICRKCER--RFKTDL--QFKSHKC-SMPQNCDKCGQVFNTLQGLFTHR 304

  Fly  1803 ITVHLLSKPHTCDECGKQFGTESALKTHIKFHGELGYQCDGCDRTFEYLKELRKHRRTHSEMFYK 1867
            ..|   ..|.:|.:|.::|.|..|...|.|.|..|....:...:.|    |:|..|.:.|::  :
Zfish   305 QEV---QPPLSCSQCEEKFATLCAWAVHKKIHTNLIIPKEIKSKRF----EVRLERISDSQL--E 360

  Fly  1868 CKFCPS-SFMRFTNFRAHMKTHLPLGVFRNEDAAS-KSPSNNNSHASSDKLENPATPIEETPLTP 1930
            ...|.| |:::..:.:            :|.|..: .:...||..|.....|:....:.::.:|.
Zfish   361 AALCSSGSYLQNNSSK------------QNSDVQNVNATETNNGSACERGAESTMENLPDSSMTQ 413

  Fly  1931 MSSGGHLYHSPDEYPNSVESCAGNSVALESYA 1962
            :||     .|..|  :.::|..|.|...:.||
Zfish   414 LSS-----QSSAE--SLLDSSGGQSSVRKVYA 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
PAT1 <959..>1109 CDD:401645
C2H2 Zn finger 1365..1388 CDD:275368
C2H2 Zn finger 1396..1416 CDD:275368
C2H2 Zn finger 1424..1445 CDD:275368
C2H2 Zn finger 1725..1746 CDD:275368 8/22 (36%)
C2H2 Zn finger 1756..1776 CDD:275368 6/19 (32%)
C2H2 Zn finger 1785..1806 CDD:275368 5/20 (25%)
zf-C2H2 1812..1834 CDD:395048 7/21 (33%)
C2H2 Zn finger 1814..1834 CDD:275368 7/19 (37%)
zf-C2H2 1839..1861 CDD:395048 4/21 (19%)
C2H2 Zn finger 1841..1861 CDD:275368 4/19 (21%)
zf-C2H2 1866..1888 CDD:395048 3/22 (14%)
C2H2 Zn finger 1868..1888 CDD:275368 3/20 (15%)
zgc:66472NP_956106.2 C2H2 Zn finger 263..282 CDD:275368 8/23 (35%)
C2H2 Zn finger 287..304 CDD:275368 4/16 (25%)
C2H2 Zn finger 313..333 CDD:275368 7/19 (37%)
CD_CSD 501..>542 CDD:349274
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.