DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mld and CG12219

DIOPT Version :10

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster


Alignment Length:447 Identity:90/447 - (20%)
Similarity:138/447 - (30%) Gaps:158/447 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1555 QQQPLMQPQSPHPSTVEMQASPTTPRKILC---------------------------CPDCE--- 1589
            |.|.|::| :..|..|    :|||..|..|                           ||.||   
  Fly   116 QPQLLLEP-AEEPKVV----TPTTANKFPCMFCEKSFKMRRYLEEHIATHTGDRPIACPYCEMAF 175

  Fly  1590 DCTSG-HSHANEQF--------EELQTLQAPPTVLTP----PSTIVSVPSPQPMVYSQHITMPSP 1641
            .|.|. ::|...:.        ||....::.....||    |:.:|.||:|.|.:.|...:..||
  Fly   176 RCRSNMYTHVKSKHTTQWLKAREERDAAKSNQNHTTPEETAPAVLVPVPAPAPALASAPASSASP 240

  Fly  1642 EQS-EPDSTTTLRQYRKRGVIVGPQGPLHLATPVASPSPSSSPSSSTVDHIP-------PASPAT 1698
            ..: .|.:|.|               |...|||..:.:.:..||..||..:|       |:....
  Fly   241 GNTVNPAATAT---------------PASSATPTTNLAAAPLPSPPTVQQLPLSVIKSQPSEAMN 290

  Fly  1699 PASPAPPPSPAVASTVQVSELRTSHHCLYCEERFTNEIS-------------------------- 1737
            ......|||.:..|..: |..|.:|.....:....:::|                          
  Fly   291 LTITKTPPSGSRGSRNR-SSRRKTHSPKKVQHTEGSDVSDEDSPQKRLKENELILANYNAVAAAV 354

  Fly  1738 -------------------------LKKHHQ------------LAHGALTTMPYVCTICKRGYRM 1765
                                     |::.||            .|....|:.....|....|..|
  Fly   355 VAAASLTGNPPGQPDSLQQRLCASLLQQQHQEQLFAVMSATAAAAAAVGTSSATTTTTTTTGTMM 419

  Fly  1766 RTALHRHMESHDVEGRPYECNICRVRFPRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTH 1830
            ......|..| :.:.||          ..|.|..:|...|.::     |..||:..|......:.
  Fly   420 AHPYGNHPPS-ETDKRP----------AAPLQAVIHAAPVSII-----CPNCGELPGQNHRCLSK 468

  Fly  1831 IKFHGELGYQCDGCDRTFEYLKELRKHRRTHSEM-FYKCKFCPSSFMRFTNFRAHMK 1886
            .|      |.||.|.::|:..:.|.:|..||:.: .:.|.|||:.|...:|...|.|
  Fly   469 PK------YACDVCGKSFKMKRYLEEHFATHTGVKLHTCAFCPTEFRSKSNMYHHTK 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
PAT1 <959..>1109 CDD:401645
C2H2 Zn finger 1365..1388 CDD:275368
C2H2 Zn finger 1396..1416 CDD:275368
C2H2 Zn finger 1424..1445 CDD:275368
C2H2 Zn finger 1725..1746 CDD:275368 4/83 (5%)
C2H2 Zn finger 1756..1776 CDD:275368 4/19 (21%)
C2H2 Zn finger 1785..1806 CDD:275368 3/20 (15%)
zf-C2H2 1812..1834 CDD:395048 5/21 (24%)
C2H2 Zn finger 1814..1834 CDD:275368 5/19 (26%)
zf-C2H2 1839..1861 CDD:395048 7/21 (33%)
C2H2 Zn finger 1841..1861 CDD:275368 6/19 (32%)
zf-C2H2 1866..1888 CDD:395048 8/21 (38%)
C2H2 Zn finger 1868..1888 CDD:275368 8/19 (42%)
CG12219NP_572312.1 zf-AD 2..91 CDD:214871
PHA00733 <117..189 CDD:177301 17/76 (22%)
C2H2 Zn finger 140..160 CDD:275368 1/19 (5%)
zf-H2C2_2 152..177 CDD:463886 4/24 (17%)
C2H2 Zn finger 168..186 CDD:275368 7/17 (41%)
C2H2 Zn finger 473..493 CDD:275370 6/19 (32%)
C2H2 Zn finger 501..522 CDD:275370 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.