DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mld and ZNF544

DIOPT Version :9

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_001374339.1 Gene:ZNF544 / 27300 HGNCID:16759 Length:769 Species:Homo sapiens


Alignment Length:975 Identity:177/975 - (18%)
Similarity:308/975 - (31%) Gaps:324/975 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   934 CFENIE---TPEEGQNLHLELTQFLRDLQPSQSDPPAGEQVEKIEMETQPSTVQM-------DVQ 988
            |||::.   |.||.:.|.|......|:                :.:||....|.:       ||.
Human    69 CFEDVAMAFTQEEWEQLDLAQRTLYRE----------------VTLETWEHIVSLGLFLSKSDVI 117

  Fly   989 SNLPVQAADTQPQNESANHSPFESPISSPQVQSQIELQMEPQIETQMQPQIETRMQHDVLSVQSP 1053
            |.|        .|.|....:..|:|........:..|..|       :.:....:.|.|...:|.
Human   118 SQL--------EQEEDLCRAEQEAPRDWKATLEENRLNSE-------KDRAREELSHHVEVYRSG 167

  Fly  1054 QNHQPQV---QSHDQSQMQHQIPPQIEPQIEVQNQEQNTLQLVPQAQHQVV---PHVQLQ---SQ 1109
            ....|.:   :..|||.             :::..::|:|:.:.....::.   .|.:|:   ..
Human   168 PEEPPSLVLGKVQDQSN-------------QLREHQENSLRFMVLTSERLFAQREHCELELGGGY 219

  Fly  1110 LVPHVQTQGTTTTVTYEQIYQQHIVQQTVQQSSNKMQVISLPSAGSETTRQWQTQQSQQQ--QQV 1172
            .:|...:...||..|.....:.:...:.::|:|   ..|:....|:: .:..::.|..:.  |.:
Human   220 SLPSTLSLLPTTLPTSTGFPKPNSQVKELKQNS---AFINHEKNGAD-GKHCESHQCARAFCQSI 280

  Fly  1173 QWSSVGGLEAIKSAPVESVAPTTTTYYISASDLYPQQTETYTMLQPASNESYVIEQVNHQQQHCQ 1237
            ..|.:|.:|..|..|.|.:....:..|.|:...:.:   |:::.:....:.|     .:...|  
Human   281 YLSKLGNVETGKKNPYEYIVSGDSLNYGSSLCFHGR---TFSVKKSDDCKDY-----GNLFSH-- 335

  Fly  1238 QQIQMSQQQ--H--QRQHQQQQAQQQQQPIMILIQQPEIQQPVASASNPQQAPLHIYN------- 1291
             .:.:::|:  |  :.|::..:.::.....:.|:|        ...|.|.:.|.....       
Human   336 -SVSLNEQKPVHFGKSQYECDECRETCSESLCLVQ--------TERSGPGETPFRCEERCAAFPM 391

  Fly  1292 AATSNDVHQMQHTQRQQIRQQ---------YQHQQYQRLQQPQQTRVVQSHPVLGMPGATSISTK 1347
            |::.:|.:.:|.|::..:..|         ..||:....::|                       
Human   392 ASSFSDCNIIQTTEKPSVCNQCGKSFSCCKLIHQRTHTGEKP----------------------- 433

  Fly  1348 VTPIPVTAARGRPLTLKCRFCHNGPRFSSSLEYSRHIIDLHPAVAPFNCPHCPMAFAGRTKRSQH 1412
                           .:|..|  |..||.|.:...| ...|....|:.|..|..:|..|:|...|
Human   434 ---------------FECTQC--GKSFSQSYDLVIH-QRTHTGEKPYECDLCGKSFTQRSKLITH 480

  Fly  1413 ILSHHVVQQYQCGQCSHVFPAQKALDVHIQRFHMTLK---TDPSGAVKVEDVQLQITSERRPRG- 1473
            ...|...:.|||.:|...|.....|.|| ||.|...|   ....|....:..:| :|.:|...| 
Human   481 QRIHTGEKPYQCIECRKSFRWNSNLIVH-QRIHTGEKPYECTHCGKSFSQSYEL-VTHKRTHTGE 543

  Fly  1474 RPYKPRLQLQQHQLQPQQKLQVQQHQQQQKALQQLPQAQHHQQQQQPQLQQEVLQQVQQLQVQVQ 1538
            :|:|    ..|......||..:..||:....          ::..:..|..:...|..:|..   
Human   544 KPFK----CTQCGKSFSQKYDLVVHQRTHTG----------EKPYECNLCGKSFSQSSKLIT--- 591

  Fly  1539 PQQHQQHQQVLQVQQPQQQPLMQPQSPHPSTVEMQASPTTPRKILCCPDCEDCTSGHSHANEQFE 1603
                  ||::...::|.|                            |.:|......:|:      
Human   592 ------HQRIHTGEKPYQ----------------------------CIECGKSFRWNSN------ 616

  Fly  1604 ELQTLQAPPTVLTPPSTIVSVPSPQPMVYSQHITMPSPEQSEPDSTTTLRQYRKRGVIVGPQGPL 1668
                                      :|..|.|                                
Human   617 --------------------------LVIHQRI-------------------------------- 623

  Fly  1669 HLATPVASPSPSSSPSSSTVDHIPPASPATPASPAPPPSPAVASTVQVSELRTSHHCLYCEERFT 1733
                                 |       |...|                    :.|.:|.:.|:
Human   624 ---------------------H-------TGEKP--------------------YDCTHCGKSFS 640

  Fly  1734 NEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQL 1798
            ....|..|.:...|   ..||.|..|.:.:...|.|.||::.|..| :||:||.|...|.|.|.|
Human   641 QSYQLVAHKRTHTG---EKPYECNECGKAFNRSTQLIRHLQIHTGE-KPYKCNQCNKAFARSSYL 701

  Fly  1799 TLHKITVHLLSKPHTCDECGKQFGTESALKTHIKFH-GELGYQCDGCDRTFEYLKELRKHRRTHS 1862
            .:|:.| |...||..|.:|||.|...|.|.:|.:.| ||..|:|..|.::|....:|..|||||:
Human   702 VMHQRT-HTGEKPFECSQCGKAFSGSSNLLSHHRIHSGEKPYECSDCGKSFRQQSQLVVHRRTHT 765

  Fly  1863  1862
            Human   766  765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
C2H2 Zn finger 1365..1388 CDD:275368 7/22 (32%)
C2H2 Zn finger 1396..1416 CDD:275368 6/19 (32%)
C2H2 Zn finger 1424..1445 CDD:275368 8/20 (40%)
C2H2 Zn finger 1725..1746 CDD:275368 5/20 (25%)
C2H2 Zn finger 1756..1776 CDD:275368 6/19 (32%)
C2H2 Zn finger 1785..1806 CDD:275368 9/20 (45%)
C2H2 Zn finger 1814..1834 CDD:275368 8/19 (42%)
zf-C2H2 1839..1861 CDD:278523 8/21 (38%)
C2H2 Zn finger 1841..1861 CDD:275368 7/19 (37%)
C2H2 Zn finger 1868..1888 CDD:275368
ZNF544NP_001374339.1 KRAB 68..127 CDD:214630 18/81 (22%)
C2H2 Zn finger 410..428 CDD:275368 3/17 (18%)
zf-H2C2_2 424..445 CDD:404364 7/60 (12%)
C2H2 Zn finger 436..456 CDD:275368 7/22 (32%)
COG5048 460..>753 CDD:227381 93/462 (20%)
C2H2 Zn finger 464..484 CDD:275368 6/19 (32%)
C2H2 Zn finger 492..512 CDD:275368 8/20 (40%)
C2H2 Zn finger 520..540 CDD:275368 4/20 (20%)
C2H2 Zn finger 548..568 CDD:275368 5/19 (26%)
C2H2 Zn finger 576..596 CDD:275368 5/28 (18%)
C2H2 Zn finger 604..624 CDD:275368 6/104 (6%)
C2H2 Zn finger 632..652 CDD:275368 5/19 (26%)
C2H2 Zn finger 660..680 CDD:275368 6/19 (32%)
C2H2 Zn finger 688..708 CDD:275368 9/20 (45%)
C2H2 Zn finger 716..736 CDD:275368 8/19 (42%)
C2H2 Zn finger 744..764 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.