DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and Zfp729a

DIOPT Version :10

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_001388795.1 Gene:Zfp729a / 212281 MGIID:3036250 Length:994 Species:Mus musculus


Alignment Length:542 Identity:127/542 - (23%)
Similarity:182/542 - (33%) Gaps:171/542 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1364 KCRFCHNGPRFSSSLEYSRHIIDLHPAVAPFNCPHCPMAFAGRTKRSQHILSHHVVQQYQCGQCS 1428
            :|..|.....|.|||...:.|   |....|:.|..|..||...:..|:|...|...:.|:|.:|.
Mouse   505 QCEVCGKAFCFPSSLSKHKRI---HTGEKPYKCKECGKAFRSLSSLSKHKRIHTGEKPYKCEECG 566

  Fly  1429 HVFPAQKAL---------------DVHIQRFHMTLKTDPSGAVKVEDVQLQITSERRPRGRPYKP 1478
            ..|.....|               ||..|.||:     ||   |:...::..|.|     :|||.
Mouse   567 KAFHYPSLLSKHKIIHTEEKPYKCDVCGQAFHV-----PS---KLSHHKIIHTGE-----KPYKC 618

  Fly  1479 R---------LQLQQHQLQPQQKLQVQQHQQQQKALQQLPQAQHHQQQQQPQLQQEVLQQVQQLQ 1534
            .         |.|.:|:         :.|..:.....|:..                       :
Mouse   619 EVCGKAFCIPLLLSKHK---------RVHTGENPYNSQVCS-----------------------K 651

  Fly  1535 VQVQPQQHQQHQQVLQVQQPQQQPLMQPQSPHPSTVEMQASPTTPRKILCCP-DCEDCTSGHSHA 1598
            ..|.|.:..:|::|...::|.:..:.......||.:.:.....|..|    | .||||.....: 
Mouse   652 AFVYPSKLSKHKKVRTKEKPYKCEVCGKAFRFPSLLLIHKGMHTGEK----PYKCEDCGKAFHY- 711

  Fly  1599 NEQFEELQTLQAPPTVLTPPSTIVSVPSPQPMVYSQH---ITMPSPEQSEPDSTTTLRQYRKRGV 1660
                                          |.:.|:|   .|...|.|.|               
Mouse   712 ------------------------------PSLLSKHKRIHTGEKPYQCE--------------- 731

  Fly  1661 IVGPQGPLHLATPVASPSPSSSPSSSTVDHIPPASPATPASPAPPPSPAVASTVQVSELRTSHHC 1725
            :.|..  .|:         |||.|...:.|       |...|                    :.|
Mouse   732 VCGKD--FHV---------SSSLSKHRIIH-------TGEKP--------------------YKC 758

  Fly  1726 LYCEERFTNEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRV 1790
            ..|.:.|....||.||.:...|   ..||.|..|.:.:...:.|.:|..||..| :||.|::|..
Mouse   759 EICGKTFRFSSSLSKHKRNHTG---KKPYKCEECGKAFHFPSILAKHKISHTGE-KPYNCDLCGK 819

  Fly  1791 RFPRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTHIKFH-GELGYQCDGCDRTFEYLKEL 1854
            .|...|.|:.||: :|...|||.||.|||.|...|.|..|.|.| ||..|:|:.|...|.:...|
Mouse   820 AFHYASLLSKHKM-IHTGEKPHKCDICGKAFHYPSKLSNHKKIHTGEKPYKCEVCGNVFCFASSL 883

  Fly  1855 RKHRRTHS-EMFYKCKFCPSSF 1875
            .||:|.|: |..|||:.|..:|
Mouse   884 SKHKRIHTGENPYKCEVCGKAF 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
PAT1 <959..>1109 CDD:401645
C2H2 Zn finger 1365..1388 CDD:275368 7/22 (32%)
C2H2 Zn finger 1396..1416 CDD:275368 6/19 (32%)
C2H2 Zn finger 1424..1445 CDD:275368 7/35 (20%)
C2H2 Zn finger 1725..1746 CDD:275368 7/20 (35%)
C2H2 Zn finger 1756..1776 CDD:275368 4/19 (21%)
C2H2 Zn finger 1785..1806 CDD:275368 7/20 (35%)
zf-C2H2 1812..1834 CDD:395048 11/21 (52%)
C2H2 Zn finger 1814..1834 CDD:275368 10/19 (53%)
zf-C2H2 1839..1861 CDD:395048 8/21 (38%)
C2H2 Zn finger 1841..1861 CDD:275368 7/19 (37%)
zf-C2H2 1866..1888 CDD:395048 5/10 (50%)
C2H2 Zn finger 1868..1888 CDD:275368 3/8 (38%)
Zfp729aNP_001388795.1 KRAB 36..94 CDD:214630
C2H2 Zn finger 114..131 CDD:275368
C2H2 Zn finger 142..162 CDD:275368
SFP1 <164..233 CDD:227516
C2H2 Zn finger 170..190 CDD:275368
C2H2 Zn finger 198..218 CDD:275368
C2H2 Zn finger 226..246 CDD:275368
COG5048 250..691 CDD:227381 46/233 (20%)
C2H2 Zn finger 254..274 CDD:275368
C2H2 Zn finger 282..302 CDD:275368
C2H2 Zn finger 310..330 CDD:275368
C2H2 Zn finger 338..358 CDD:275368
C2H2 Zn finger 366..386 CDD:275368
C2H2 Zn finger 394..414 CDD:275368
C2H2 Zn finger 425..442 CDD:275368
C2H2 Zn finger 450..470 CDD:275368
C2H2 Zn finger 478..498 CDD:275368
C2H2 Zn finger 506..526 CDD:275368 7/22 (32%)
COG5048 530..972 CDD:227381 119/514 (23%)
C2H2 Zn finger 534..554 CDD:275368 6/19 (32%)
C2H2 Zn finger 562..582 CDD:275368 4/19 (21%)
C2H2 Zn finger 590..610 CDD:275368 8/27 (30%)
C2H2 Zn finger 618..638 CDD:275368 3/28 (11%)
C2H2 Zn finger 647..666 CDD:275368 4/41 (10%)
C2H2 Zn finger 674..694 CDD:275368 2/19 (11%)
C2H2 Zn finger 702..722 CDD:275368 7/50 (14%)
C2H2 Zn finger 730..750 CDD:275368 7/45 (16%)
C2H2 Zn finger 758..778 CDD:275368 7/19 (37%)
C2H2 Zn finger 786..806 CDD:275368 4/19 (21%)
C2H2 Zn finger 814..834 CDD:275368 7/20 (35%)
C2H2 Zn finger 842..862 CDD:275368 10/19 (53%)
C2H2 Zn finger 870..890 CDD:275368 7/19 (37%)
C2H2 Zn finger 898..918 CDD:275368 3/8 (38%)
C2H2 Zn finger 926..946 CDD:275368
C2H2 Zn finger 954..974 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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