Protein Alignment mld and syd-9

DIOPT Version :9

• Sequence 1: NP_001247289.1
• Gene: mld / 2768685
• FlyBaseID: FBgn0263490
• Length: 1965
• Species: Drosophila melanogaster
• Sequence 2: NP_001362162.1
• Gene: syd-9 / 180985
• WormBaseID: WBGene00044068
• Length: 554
• Species: Caenorhabditis elegans
• Alignment Length: 506
• Identity: 100/506 - (19%)
• Similarity: 164/506 - (32%)
• Gaps: 169/506 - (33%)

  Fly  1319 QRLQQPQ------QTRVVQSH-PVLGMPGATSISTKVTPIPVTAARGRPLTLKCRFCHNGPRFSS 1376
            :.|..||      .|:::|.| .:.....:..:|.|.|..||    |......|..|....||.|
 Worm    18 ESLTCPQCPKSFSSTKLLQQHQQMFHTDKSVLLSLKSTDAPV----GMDRAFICETCGKAFRFRS 78

  Fly  1377 SLEYSRHIIDLHPAVAPFNCPHCPMAFAGRTKR-----SQHILSHHVVQQYQC------------ 1424
            :|...|.:   |.|:.|:.|..|     |::.|     ::|||.||..:|.:.
 Worm    79 NLAEHRSV---HTALKPYVCKFC-----GKSSRLKGNLTKHILKHHKKEQNEAIAKDDIIVKKAP 135

  Fly  1425 -------GQCSH------------VFPAQKAL------------------------DVHIQRFHM 1446
                   |..::            |.....||                        ::....:::
 Worm   136 KIVTKDNGPTTNGSTPTTSTATPSVITVSSALASSNGHNNNNNNHAVNNNLRTIKMELEDPDYNL 200

  Fly  1447 TLKTDPSGAVKVEDVQLQITSERRPRGRPYKPRLQLQQHQLQPQQKLQVQQHQQQQKALQQLPQA 1511
            ..|:.|:..|.    ::..|....||.||....::.....:.|  .:.|.:..::...|
 Worm   201 IAKSAPTPVVS----KIVATHTVTPRSRPTPKDIKEILETIAP--SVGVSETPEEMCLL------ 253

  Fly  1512 QHHQQQQQPQLQQEVLQQVQQLQVQVQPQQHQQHQQVLQVQQPQQQPLMQPQSPHPSTVEMQASP 1576
               .:....:..:.||..:...........|||.|||::..:.                |:..||
 Worm   254 ---PKDASSESDRSVLISLGFDFGSTLSLNHQQLQQVVRELKG----------------ELSISP 299

  Fly  1577 TTPRKILCCPDCEDCTSGHSHANEQFEELQTLQAPPTVLTPPSTIVSVPSPQPMVYSQHITMPSP 1641
            .|.:            |.||   :.||:   ...||..:...||:....:...|:.:  .|..|.
 Worm   300 DTVQ------------SDHS---DDFEQ---DSPPPMAIANISTVGGEATLAAMIVA--ATNASG 344

  Fly  1642 EQSE--PDSTTTLRQYRKRGVIVGPQGPLHLATPVASPSPSSS---------------------- 1682
            ::.:  ||||.|     ::|  ..||..|   :|.:.||.||.
 Worm   345 QRGDGTPDSTDT-----QKG--CSPQREL---SPESDPSTSSGDSCPSPPKMLHCKECGTLVRKS 399

  Fly  1683 ---PSSSTVDH-IPPASPATPASPAPPPSPAVASTVQVSELRTSHHCLYCE 1729
               |...|:.| .||...|.|....|.|...|.::...:|||...:.: ||
 Worm   400 SHLPIHMTMSHGYPPPLVAAPVEEKPAPEQPVNASSLHNELRVISNAI-CE 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mld	NP_001247289.1	zf-AD	186..255	CDD:214871
		C2H2 Zn finger	1365..1388	CDD:275368	7/22 (32%)
		C2H2 Zn finger	1396..1416	CDD:275368	7/24 (29%)
		C2H2 Zn finger	1424..1445	CDD:275368	4/75 (5%)
		C2H2 Zn finger	1725..1746	CDD:275368	2/5 (40%)
		C2H2 Zn finger	1756..1776	CDD:275368
		C2H2 Zn finger	1785..1806	CDD:275368
		C2H2 Zn finger	1814..1834	CDD:275368
		zf-C2H2	1839..1861	CDD:278523
		C2H2 Zn finger	1841..1861	CDD:275368
		C2H2 Zn finger	1868..1888	CDD:275368
syd-9	NP_001362162.1	C2H2 Zn finger	22..43	CDD:275368	5/20 (25%)
		zf-C2H2	65..87	CDD:333835	7/24 (29%)
		C2H2 Zn finger	67..87	CDD:275368	7/22 (32%)
		zf-C2H2	93..115	CDD:333835	7/26 (27%)
		C2H2 Zn finger	95..115	CDD:275368	7/24 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160156782
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930