DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and Zfp111

DIOPT Version :9

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:NP_579857.1 Gene:Zfp111 / 170849 RGDID:620595 Length:744 Species:Rattus norvegicus


Alignment Length:734 Identity:147/734 - (20%)
Similarity:247/734 - (33%) Gaps:217/734 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1222 ESYVIEQVNHQQQHCQQQIQMSQQQHQRQHQQQQAQQQQQPIMILIQQPEIQQPVASASNPQQAP 1286
            ::::.::.|| |:||.|.:..::.:...||...|..|:...              .|:|.|.|..
  Rat   153 KTHLRKRQNH-QKHCLQTLMKNKPELLTQHSPVQRTQEDSR--------------HSSSVPIQQS 202

  Fly  1287 LHI-------------YNAATSNDVHQMQHTQRQQIRQQYQHQQYQRLQQPQQTRVVQSHPVLGM 1338
            :|.             ::.:::...|:..||..:..|.....:.:.|..              |:
  Rat   203 VHPGRKRYWCHECGKGFSQSSALQTHRRVHTGEKPCRDNSCRKSFSRSS--------------GL 253

  Fly  1339 PGATSISTKVTPIPVTAARGRPLTLKCRFCHNG-PRFSSSLEYSRHIIDLHPAVAPFNCPHCPMA 1402
            .....:.|...|            .:|:.|..| .|:|....:.|    :|....|:.|..|...
  Rat   254 SIHRQVHTGERP------------YRCKVCGKGFLRWSHLQAHER----IHTGEKPYKCGECGKR 302

  Fly  1403 FAGRTKRSQHILSHHVVQQYQCGQCSHVFPAQKALDVHIQRFH---MTLKTDPSGAVKVEDVQLQ 1464
            |:..:....|...|...:.|:|.:|...|.....|.:| ||.|   ...|.:..|  |...:...
  Rat   303 FSCISNLHTHQRFHSKEKPYKCDKCGKCFSLNFNLHIH-QRVHTGEKPYKCEECG--KCFSLSFN 364

  Fly  1465 ITSERRPR--GRPYKPRLQLQQHQLQPQQKLQVQQHQQQQKALQQLPQAQHHQQ--QQQPQLQQE 1525
            :.|.:|..  .:|||                    .::..|........|.|:|  .::..|.::
  Rat   365 LHSHQRVHTGEKPYK--------------------CEECGKCFSSASSFQRHRQIHIKEKTLHRD 409

  Fly  1526 V----------LQQVQQLQVQVQPQQHQQ-------------HQQVLQVQQPQQQPLMQPQSPHP 1567
            |          ||..|::.:|.:|.:...             |::|...::|.:           
  Rat   410 VCGKGSSRDSNLQTHQRVHIQEKPYRCNSCGKSFRCSMDLNIHRRVHTGEKPYK----------- 463

  Fly  1568 STVEMQASPTTPRKILCCPDCEDCTSGHSHANEQFEELQTLQAPPTVLTPPSTIVSVPSPQPMVY 1632
                                ||.|..|       |..|..|||...:.............:...|
  Rat   464 --------------------CEVCGKG-------FNYLSHLQAHEKIHADQKPYKCEYCGRRFSY 501

  Fly  1633 SQHI-------TMPSPEQSEPDSTTTLRQYRKRGVIVGPQGPLHLATPVASPSPSSSPSSSTVDH 1690
            |.::       |...|.:.|                              ....|.|.:||...|
  Rat   502 SSNLHTHQRVHTGEKPYKCE------------------------------ECGKSFSLASSLQAH 536

  Fly  1691 IPPASPATPASPAPPPSPAVASTVQVSELRTSHHCLYCEERFTNEISLKKHHQLAHGALTTMPYV 1755
                                 ..||..  :....|..|::||:...:|:.|.::..|   ..||.
  Rat   537 ---------------------QRVQTG--KKPFKCNACQKRFSQAWNLQAHQRVHTG---EKPYK 575

  Fly  1756 CTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQLTLHKITVHLLSKPHTCDECGKQ 1820
            |..|.:.:..|::|..|...|..| :|::|..|...|...|.||.|: .||...||:.|.||||.
  Rat   576 CDTCGKAFGQRSSLQIHQRIHTGE-KPFKCEECGKEFSLNSGLTAHR-RVHTGEKPYECTECGKG 638

  Fly  1821 FGTESALKTHIKFH-GELGYQCDGCDRTFEYLKELRKHRRTHS-EMFYKCKFCPSSFMRFTNFRA 1883
            |...|:|:||.:.| ||..:||:.|.:.|..:..|:.|:|.|: |..|||..|..:|.:.:..:.
  Rat   639 FSLASSLRTHQRIHTGEKPFQCNECQKRFSQVSHLQSHQRVHTGEKPYKCDTCGKAFSQKSGLQV 703

  Fly  1884 HMKTHLPLGVFRNEDAASK 1902
            |.:.|.....|:.|:...:
  Rat   704 HRRIHTGEKPFKCEECGKE 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
C2H2 Zn finger 1365..1388 CDD:275368 6/23 (26%)
C2H2 Zn finger 1396..1416 CDD:275368 4/19 (21%)
C2H2 Zn finger 1424..1445 CDD:275368 7/20 (35%)
C2H2 Zn finger 1725..1746 CDD:275368 6/20 (30%)
C2H2 Zn finger 1756..1776 CDD:275368 5/19 (26%)
C2H2 Zn finger 1785..1806 CDD:275368 7/20 (35%)
C2H2 Zn finger 1814..1834 CDD:275368 10/19 (53%)
zf-C2H2 1839..1861 CDD:278523 7/21 (33%)
C2H2 Zn finger 1841..1861 CDD:275368 6/19 (32%)
C2H2 Zn finger 1868..1888 CDD:275368 4/19 (21%)
Zfp111NP_579857.1 KRAB 8..>54 CDD:214630
KRAB 8..47 CDD:279668
COG5048 <106..396 CDD:227381 55/310 (18%)
C2H2 Zn finger 212..232 CDD:275368 1/19 (5%)
C2H2 Zn finger 241..260 CDD:275368 2/32 (6%)
C2H2 Zn finger 268..288 CDD:275368 6/23 (26%)
zf-H2C2_2 280..305 CDD:290200 6/28 (21%)
C2H2 Zn finger 296..316 CDD:275368 4/19 (21%)
COG5048 306..721 CDD:227381 113/533 (21%)
C2H2 Zn finger 324..344 CDD:275368 7/20 (35%)
zf-H2C2_2 340..360 CDD:290200 7/22 (32%)
C2H2 Zn finger 352..372 CDD:275368 4/21 (19%)
zf-H2C2_2 367..389 CDD:290200 6/41 (15%)
C2H2 Zn finger 380..400 CDD:275368 4/19 (21%)
C2H2 Zn finger 409..428 CDD:275368 4/18 (22%)
zf-H2C2_2 420..445 CDD:290200 5/24 (21%)
C2H2 Zn finger 436..456 CDD:275368 1/19 (5%)
zf-H2C2_2 448..473 CDD:290200 8/62 (13%)
C2H2 Zn finger 464..484 CDD:275368 9/26 (35%)
C2H2 Zn finger 492..512 CDD:275368 2/19 (11%)
zf-H2C2_2 507..528 CDD:290200 4/50 (8%)
C2H2 Zn finger 520..540 CDD:275368 6/70 (9%)
C2H2 Zn finger 548..568 CDD:275368 6/19 (32%)
zf-H2C2_2 560..583 CDD:290200 7/25 (28%)
C2H2 Zn finger 576..596 CDD:275368 5/19 (26%)
zf-H2C2_2 588..612 CDD:290200 7/24 (29%)
C2H2 Zn finger 604..624 CDD:275368 7/20 (35%)
zf-H2C2_2 617..640 CDD:290200 12/23 (52%)
C2H2 Zn finger 632..652 CDD:275368 10/19 (53%)
zf-H2C2_2 644..669 CDD:290200 10/24 (42%)
C2H2 Zn finger 660..680 CDD:275368 6/19 (32%)
zf-H2C2_2 672..697 CDD:290200 10/24 (42%)
C2H2 Zn finger 688..708 CDD:275368 4/19 (21%)
zf-H2C2_2 701..723 CDD:290200 4/22 (18%)
C2H2 Zn finger 716..736 CDD:275368 1/7 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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