DRSC/TRiP Functional Genomics Resources

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Protein Alignment mld and Zfp160

DIOPT Version :10

Sequence 1:NP_001247289.1 Gene:mld / 2768685 FlyBaseID:FBgn0263490 Length:1965 Species:Drosophila melanogaster
Sequence 2:XP_063133080.1 Gene:Zfp160 / 100365363 RGDID:2319215 Length:670 Species:Rattus norvegicus


Alignment Length:646 Identity:137/646 - (21%)
Similarity:204/646 - (31%) Gaps:207/646 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1357 RGRPLTLK-----CRFCHNGPRFSSSLEYSRHIIDLHPAVAPFNCPHCPMAFAGRTKRSQHILSH 1416
            :|:...:|     |..|....|::|||.|.|.|   |.....:.|..|..||..|:....|...|
  Rat   135 KGQKAAIKEKPYQCNECDKVFRYTSSLAYHRQI---HTGEKLYKCVECGKAFFRRSYLLVHERHH 196

  Fly  1417 HVVQQYQCGQCSHVFPAQKALDVHIQRFHMTLKTDPSGAVKVEDVQLQITSERRPRGRPYKPRLQ 1481
            ...:.|:|.:|..||.....|..| :|.|                    |.|     :|||    
  Rat   197 SGAKPYKCNECGKVFSQNSHLKSH-RRIH--------------------TGE-----KPYK---- 231

  Fly  1482 LQQHQLQPQQKLQVQQHQQQQKALQQLPQAQHH---QQQQQPQLQQE---VLQQVQQLQVQVQPQ 1540
                            .....||........||   ....:|....|   |..|...|.:     
  Rat   232 ----------------CNDCGKAFSVRSNLTHHLVIHTGDKPYKCNECGKVFSQTSSLTI----- 275

  Fly  1541 QHQQHQQVLQVQQPQQQPLMQPQSPHPSTVEMQASPTTPRKILCCPDCEDCTSGHSHANEQFEEL 1605
                |::....::|.:                            |.:|....|.||:.|.. :.:
  Rat   276 ----HRRTHTGEKPYR----------------------------CNECGKVFSSHSNLNTH-QAI 307

  Fly  1606 QTLQAP------PTVLTPPSTIVSVPSPQPMVYSQHITMPSPEQ-----------SEPDSTTTLR 1653
            .|.:.|      ..|.|..|.:           :.|....:.|:           |...|.||  
  Rat   308 HTGEKPYKCSECGKVFTQNSHL-----------ANHWRTHTGEKPYKCNECGKAFSVYSSLTT-- 359

  Fly  1654 QYRKRGVIVGPQGPLHLATPVASPSPSS--------SPSSSTVDHIPPASPATPASPAPPPSPAV 1710
                           |||..... .|..        :.:|...:|....|...|           
  Rat   360 ---------------HLAIHTGE-KPYKCEECGKVFTQNSHLANHRGIHSGEKP----------- 397

  Fly  1711 ASTVQVSELRTSHHCLYCEERFTNEISLKKHHQLAHGALTTMPYVCTICKRGYRMRTALHRHMES 1775
                        :.|..|.:.|....:|.:|.::..|   ..||.|:.|.:.:.:|::|..|...
  Rat   398 ------------YKCEECGKHFNQTSNLARHWRVHTG---EKPYKCSECGKAFSVRSSLTSHQVI 447

  Fly  1776 HDVEGRPYECNICRVRFPRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTHIKFH-GELGY 1839
            |..| :||:|..|...|.:.|.|::|: .:|...||:.|:||||.|.:.|.|.||...| |:..|
  Rat   448 HTGE-KPYKCAECGKVFSQTSSLSIHQ-RIHTGEKPYRCNECGKAFNSHSNLNTHQVIHTGQKPY 510

  Fly  1840 QCDGCDRTFEYLKELRKHRRTHS-EMFYKCKFCPSSFMRFTNFRAHMKTHLPLGVFRNEDAASKS 1903
            :|..|.:.|.....|..|.|||: |..|||..|..:|..:::...|...|.....|:..:..  .
  Rat   511 KCLECGKVFTQNSHLANHHRTHTGEKPYKCNECGKAFSVYSSLTTHQAIHTGEKPFKCNECG--K 573

  Fly  1904 PSNNNSHASSDKLENPATPIEETPLTPMSSGGHLYHSPDEYPNSVESCAGNSVALESYATT 1964
            ....|||.:|                      |......|.|.....| |.:.::.|..||
  Rat   574 VFTQNSHLAS----------------------HRRTHTGEKPYKCSKC-GKAFSVRSSLTT 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mldNP_001247289.1 zf-AD 186..255 CDD:214871
PAT1 <959..>1109 CDD:401645
C2H2 Zn finger 1365..1388 CDD:275368 9/22 (41%)
C2H2 Zn finger 1396..1416 CDD:275368 6/19 (32%)
C2H2 Zn finger 1424..1445 CDD:275368 7/20 (35%)
C2H2 Zn finger 1725..1746 CDD:275368 5/20 (25%)
C2H2 Zn finger 1756..1776 CDD:275368 5/19 (26%)
C2H2 Zn finger 1785..1806 CDD:275368 6/20 (30%)
zf-C2H2 1812..1834 CDD:395048 10/21 (48%)
C2H2 Zn finger 1814..1834 CDD:275368 10/19 (53%)
zf-C2H2 1839..1861 CDD:395048 7/21 (33%)
C2H2 Zn finger 1841..1861 CDD:275368 6/19 (32%)
zf-C2H2 1866..1888 CDD:395048 6/21 (29%)
C2H2 Zn finger 1868..1888 CDD:275368 4/19 (21%)
Zfp160XP_063133080.1 None
Blue background indicates that the domain is not in the aligned region.

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