DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33342 and CG42812

DIOPT Version :9

Sequence 1:NP_001097904.1 Gene:CG33342 / 2768684 FlyBaseID:FBgn0086610 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001097901.2 Gene:CG42812 / 50072 FlyBaseID:FBgn0261994 Length:217 Species:Drosophila melanogaster


Alignment Length:220 Identity:52/220 - (23%)
Similarity:88/220 - (40%) Gaps:43/220 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QPN--SSSVLLLFVLAASAA----GDGNDRNASPGLSLSRTKRLAIFNGQGTNKIVAGLAFPIKQ 67
            :||  ::.:|::|::..|::    ...|     .||:||.:..:|....:  .:|:....|.|..
  Fly     2 KPNWLTTCILVIFLIHQSSSLLWPASSN-----LGLTLSVSTPIAELYPE--RRILIDWCFAISY 59

  Fly    68 ADTVQ-------SVW-GFVNYQA-QYVPSPVPIYWWSFWNTSTFLSTAREWRKGIRSRVFQDETR 123
            .....       .:| ||.||:| :.||.      ....:.:.:.....:...|:..:.|.... 
  Fly    60 NYPYNLTEFYSIPIWPGFANYKAKREVPQ------LEMTDENFYTKYGHDNGNGMHPKDFSAGE- 117

  Fly   124 VWLYDVVETGLERLGDRNAGACLLKCICEISQRPF--MHNSIFGEILNAVLVPSL--------DN 178
              ||..:|..|...|...  .|||:.:||::|.||  .|..:..:|:..||.||.        |.
  Fly   118 --LYAFLEDTLTGYGFHE--TCLLRSVCELAQHPFDDSHQHLLSDIVTFVLSPSQHEGFRDDEDV 178

  Fly   179 VPEKYLHARNAGKAGANCRKTYSDC 203
            ..:.|..|...|..|.:|.:.||.|
  Fly   179 YRKAYELAEQDGFLGRDCLRLYSHC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33342NP_001097904.1 DM4_12 123..203 CDD:285126 27/89 (30%)
CG42812NP_001097901.2 DM4_12 110..210 CDD:214785 29/99 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452631
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21398
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.