DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33342 and CG17780

DIOPT Version :10

Sequence 1:NP_001097904.1 Gene:CG33342 / 2768684 FlyBaseID:FBgn0086610 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_732995.1 Gene:CG17780 / 42914 FlyBaseID:FBgn0039197 Length:345 Species:Drosophila melanogaster


Alignment Length:178 Identity:43/178 - (24%)
Similarity:76/178 - (42%) Gaps:35/178 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LSLSRTKR-LAIFNGQGTNKIVAGLAFPIKQADTVQSVWGF-VNYQAQYVPSPVPIYWWSF---W 97
            |...|.|| |.|..   |.:|..|: |.:.....:.|...| ||.:...:.||:.   |:.   :
  Fly   185 LIFRRAKRYLDIIE---TTRIFVGI-FQVIVNTYINSPLKFRVNAKNNVIKSPIV---WAHGYGF 242

  Fly    98 NTSTFLSTAREWRKGIRSRVFQDETRVWLYDVVE-TGLERLGDRNAGACLLKCICEISQRPFMHN 161
            ..:|.:...||      :|.|:.:|...|::::: :||:      ..||:||..|..........
  Fly   243 RANTPVLVKRE------NRPFRRDTYELLHELIDRSGLD------GRACVLKAYCTALAGDHGQG 295

  Fly   162 SIFGEILNAVLVPSLDNVPEKYL-HARNAGKAGANCRK-TYSDCSKAF 207
            .:| ::|..|.  :||...:::: |.|.     .||.: .:|.|..:|
  Fly   296 FLF-KLLKYVF--TLDEHDKRHMPHLRE-----ENCEQIMHSHCPLSF 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33342NP_001097904.1 DM4_12 123..203 CDD:462285 18/82 (22%)
CG17780NP_732995.1 DM4_12 136..>188 CDD:462285 1/2 (50%)
DM4_12 253..338 CDD:214785 24/103 (23%)

Return to query results.
Submit another query.