DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo95E and Myo1c

DIOPT Version :9

Sequence 1:NP_001027208.1 Gene:Myo95E / 2768680 FlyBaseID:FBgn0039157 Length:1288 Species:Drosophila melanogaster
Sequence 2:XP_038942736.1 Gene:Myo1c / 65261 RGDID:620443 Length:1063 Species:Rattus norvegicus


Alignment Length:1335 Identity:351/1335 - (26%)
Similarity:552/1335 - (41%) Gaps:376/1335 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IGTWDSVLLENL-SEDSFINNIHQRYKRDHIYTYIGTSVVALNPYHHISEHSLDNVRNYGDKGIF 68
            :|..|.|||||. ||.:||.|:.:|::.:.||||||..:|::|||..:..::..::..|.....:
  Rat    46 VGVQDFVLLENFTSEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYTRQHMERYRGVSFY 110

  Fly    69 QLPPHIYGLTNLAYQSLKDQSEDQCVLLTGESGAGKTETFKMIVNFLTHIQDRSHCPPTPNVLRK 133
            ::|||::.:.:..|::|:.:..||.|:::|||||||||..|.::.|.                  
  Rat   111 EVPPHLFAVADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFY------------------ 157

  Fly   134 QSSTSSASGLVMHAHRRASSSCSGTANFIICKNRAENPSGSVSRRQSPSPGPSQRSRTRAESIER 198
                                                                             
  Rat   158 ----------------------------------------------------------------- 157

  Fly   199 QSRRHMREKIVDFDFSHHKSSENISGLPESHAHHMHPTKSCFKHQQTQVSACTAMPAAAKGSPKY 263
                                                                             
  Rat   158 ----------------------------------------------------------------- 157

  Fly   264 AVPTVYGGCRQCGHSKCVRAQSLEKEERDDLRGSNCRLSTIATATTNPAHPHRGSCSNLMRQHST 328
                                                       |.|.|| |.||..   :|....
  Rat   158 -------------------------------------------AETCPA-PERGGA---VRDRLL 175

  Fly   329 ESQPERERDRSSLMGSTQRISLYDAHKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHKSPTQRMR 393
            :|.|                                                             
  Rat   176 QSNP------------------------------------------------------------- 179

  Fly   394 ECVTCADVFLEAMGNACTLKNNNSSRYGKLFDIEIDFKGDPMGVHITHYMLEKTRITDPIIGERN 458
                    .|||.|||.||:|:||||:||..|::.||||.|:|.||..|:|||:|:.....||||
  Rat   180 --------VLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGERN 236

  Fly   459 FHIFYQLLLGADLQLLKSLKLYRNVEKY-ELLRNTTAME---EDRMNFHYTKRSLDVLGLSCEES 519
            ||:|||||.|.:.:.|:.|.|.||.:.| .|::...|..   .|:.::...:::|.|:..:.:|.
  Rat   237 FHVFYQLLEGGEEEALRRLGLERNPQSYLYLVKGQCAKVSSINDKSDWKVVRKALSVIDFTEDEV 301

  Fly   520 NSIFRVIAVVLKLGNFIFVPITNIDGTEGCQVSNVYEVQETAQLLNMEAQILINCLTRANSTNSA 584
            ..:..::|.||.|||..|.    .|.....||:...:::...:||.:|...|...||........
  Rat   302 EDLLSIVASVLHLGNIHFA----ADEDSNAQVTTENQLKYLTRLLGVEGTTLREALTHRKIIAKG 362

  Fly   585 QEDVGCEMDARQAATNRNTLCRTLYSRLFTWLVNKINESLKSTQREKN-------LALLDFYGFE 642
            :|.:. .::..|||..|:.|.:.:|||.|||||.|||.||.|...|..       |.|||.||||
  Rat   363 EELLS-PLNLEQAAYARDALAKAVYSRTFTWLVRKINRSLASKDAESPSWRSTTVLGLLDIYGFE 426

  Fly   643 ALDHNSFEQFAINYSAEKIHQNFVFHVLRSEQELYIREGLEWSRIDYFDNESICELIDKPSYGIL 707
            ...|||||||.|||..||:.|.|:...|:||||.|..||:.|..:.||:|:.||:|:::...||:
  Rat   427 VFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNKIICDLVEEKFKGII 491

  Fly   708 SLINEPHLNSNDA----LLLRVQQCCAGHPNFMT-------------TGSNSMCFQIRHYASVVN 755
            |:::|..|...:|    .|.:::.....||:|:|             .|.    |::.|||..|.
  Rat   492 SILDEECLRPGEATDLTFLEKLEDTIKHHPHFLTHKLADQKTRKSLDRGE----FRLLHYAGEVT 552

  Fly   756 YSIHRFLEKNSDMLPKYISAAFYQSKLSLVQSLFPEGNPRRQVTKKPSTLSSNIRTQLQTLLAIV 820
            ||:..||:||:|:|.:.:......|...::...|.:.....:  |:|.|:::..:..|..|:.|:
  Rat   553 YSVTGFLDKNNDLLFRNLKETMCSSTNPIMAQCFDKSELSDK--KRPETVATQFKMSLLQLVEIL 615

  Fly   821 KHRRSHYVFCIKPNEGKQPHQFDMALVQHQVRYMSLMPLVHLCRTGHCYHLLHVKFFHRYKLLNS 885
            :.:...|:.|||||:.|||.:||..|::|||:|:.||..:.:.|.|..|...:..|..|||.|..
  Rat   616 RSKEPAYIRCIKPNDAKQPGRFDEVLIRHQVKYLGLMENLRVRRAGFAYRRKYEAFLQRYKSLCP 680

  Fly   886 LTWPHFHGGSQVEGIALIIRNLPLPSAEFTIGTKNVFVRSPRTVYELEQFRRLRISELAVLIQTM 950
            .|||.:.|..| :|:|:::|:|.....|:.:|...:|:|.|:|::..|....:|...||..||..
  Rat   681 ETWPVWTGRPQ-DGVAVLVRHLGYKPEEYKMGRTKIFIRFPKTLFATEDSLEVRRQSLATKIQAA 744

  Fly   951 FRMYHARKRFQRMRHSQMIISSAWRTWRECRFGIPFTGRRHLWSLYRVAREEYRSLKYKRQVRWA 1015
            :|.:|.|::|.|::.|.:.|.|.||         ...|||      :.|:.           :||
  Rat   745 WRGFHWRQKFLRVKRSAICIQSWWR---------GTLGRR------KAAKR-----------KWA 783

  Fly  1016 IDIIGRYYRQWKIR-----------------QFLLTIPLRLPPNTLSPLSTEWPVAPAFLADASR 1063
            ...|.|..|.:.:|                 .|||.:..:||.|.   |.|.||..|..|.:||.
  Rat   784 AQTIRRLIRGFILRHAPRCPENAFFLDHVRTSFLLNLRRQLPRNV---LDTSWPTPPPALREASE 845

  Fly  1064 HLRSIYHR---WKCYIYRNSFDQTARNRMREKVTASIIFKDRKASYGRSVGHPFVGDYVRLRHNQ 1125
            .||.:..:   ||   |..|.....:.::::|..||.|||.:|.:|.:||...|:.  .||...:
  Rat   846 LLRELCMKNMVWK---YCRSISPEWKQQLQQKAVASEIFKGKKDNYPQSVPRLFIS--TRLGTEE 905

  Fly  1126 QWKKICAETNDQYVVFADIINKIARSSGKFVPILLVLSTSSLLLLDQRTLQIKYRVPASEIYRMS 1190
            ...::......:.:.:|..:.|..|...|.....|:|:.|::::::.  .::|.|:..:.:..:|
  Rat   906 ISPRVLQALGSEPIQYAVPVVKYDRKGYKPRSRQLLLTPSAVVIVED--AKVKQRIDYANLTGIS 968

  Fly  1191 LSPYLDDIAVFHVKASEFGRKKGDFVFQTGHVIEIVTKMFLVIQNATGKPPEIHISTEFEANFGQ 1255
            :|...|.:.|.||: .|..::|||.|.|:.||||.:||..|......            ..|..|
  Rat   969 VSSLSDSLFVLHVQ-REDSKQKGDVVLQSDHVIETLTKTALSADRVN------------NININQ 1020

  Fly  1256 QTVIFSFKYG--GMSDLAQGPPKVTRKANRMEIIV 1288
            .::.|:...|  |:.|...|...:..||....:.|
  Rat  1021 GSITFAGGPGRDGIIDFTSGSELLITKAKNGHLAV 1055

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo95ENP_001027208.1 Motor_domain 19..>118 CDD:277568 34/98 (35%)
Motor_domain 403..924 CDD:277568 198/548 (36%)
Myosin_TH1 1092..1267 CDD:283635 45/176 (26%)
Myo1cXP_038942736.1 MYSc_Myo1 62..718 CDD:276829 242/931 (26%)
IQ 756..776 CDD:197470 9/34 (26%)
Myosin_TH1 874..1055 CDD:399188 50/197 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D105718at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100187
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

Return to query results.
Submit another query.