DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo95E and Mhc

DIOPT Version :9

Sequence 1:NP_001027208.1 Gene:Myo95E / 2768680 FlyBaseID:FBgn0039157 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1269 Identity:281/1269 - (22%)
Similarity:465/1269 - (36%) Gaps:436/1269 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LENLSEDSFIN------NIHQRYKRDHIYTYIGTSVVALNPYHHISEHSLDNVRNYGDKGIFQLP 71
            :|::::.:.:|      |:.|||....||||.|...||:|||.....::....:.|..|...::|
  Fly    88 IEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVP 152

  Fly    72 PHIYGLTNLAYQSLKDQSEDQCVLLTGESGAGKTETFKMIVNFLTHIQDRSHCPPTPNVLRKQSS 136
            |||:.:::.||..:.....:|.:|:||||||||||..|.::.:...:                  
  Fly   153 PHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATV------------------ 199

  Fly   137 TSSASGLVMHAHRRASSSCSGTANFIICKNRAENPSGSVSRRQSPSPGPSQRSRTRAESIERQSR 201
                                                           |.|:::...|:|      
  Fly   200 -----------------------------------------------GASKKTDEAAKS------ 211

  Fly   202 RHMREKIVDFDFSHHKSSENISGLPESHAHHMHPTKSCFKHQQTQVSACTAMPAAAKGSPKYAVP 266
                                                                    ||       
  Fly   212 --------------------------------------------------------KG------- 213

  Fly   267 TVYGGCRQCGHSKCVRAQSLEKEERDDLRGSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQ 331
                              |||.:                ...|||.                   
  Fly   214 ------------------SLEDQ----------------VVQTNPV------------------- 225

  Fly   332 PERERDRSSLMGSTQRISLYDAHKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHKSPTQRMRECV 396
                                                                             
  Fly   226 ----------------------------------------------------------------- 225

  Fly   397 TCADVFLEAMGNACTLKNNNSSRYGKLFDIEIDFKGDPMGVHITHYMLEKTRITDPIIGERNFHI 461
                  |||.|||.|::|:||||:||...|.....|...|..|..|:|||.|:......||::||
  Fly   226 ------LEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHI 284

  Fly   462 FYQLLLGA-----DLQLLKSLKLYRNVEKYELL---RNTTAMEEDRMNFHYTKRSLDVLGLSCEE 518
            |||::.|:     |:.||..     |:..|.::   :.|.|..:|...|..|.::.|:||.:.:|
  Fly   285 FYQIMSGSVPGVKDICLLTD-----NIYDYHIVSQGKVTVASIDDAEEFSLTDQAFDILGFTKQE 344

  Fly   519 SNSIFRVIAVVLKLGNFIF-----VPITNIDGTE---------GCQVSNVYEVQETAQLLNMEAQ 569
            ...::|:.|.|:.:|...|     ......||.|         ||..:.:|:     .||....:
  Fly   345 KEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYK-----NLLKPRIK 404

  Fly   570 ILINCLTRANSTNSAQEDVGCEMDARQAATNRNTLCRTLYSRLFTWLVNKINESLKSTQREKN-L 633
            :....:|:..:.......:|             .||:.::.|||.|||.|.||:|.:.|:.:: :
  Fly   405 VGNEFVTQGRNVQQVTNSIG-------------ALCKGVFDRLFKWLVKKCNETLDTQQKRQHFI 456

  Fly   634 ALLDFYGFEALDHNSFEQFAINYSAEKIHQNFVFHVLRSEQELYIREGLEWSRIDY-FDNESICE 697
            .:||..|||..::|.|||..||::.||:.|.|..|:...|||.|.|||::|:.||: .|..:..:
  Fly   457 GVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACID 521

  Fly   698 LIDKPSYGILSLINE------------------PHLNSNDALLLRVQQCCAGHPNFMTTGSNSMC 744
            ||:|| .||||::.|                  .||..:...         ..|.....|..:..
  Fly   522 LIEKP-MGILSILEEESMFPKATDQTFSEKLTNTHLGKSAPF---------QKPKPPKPGQQAAH 576

  Fly   745 FQIRHYASVVNYSIHRFLEKNSDMLPKYISAAFYQSKLSLVQSLFPE-------GNPRRQVTKKP 802
            |.|.|||..|:|:|..:||||.|.|...:...|.:|:..|:..:|.:       |...:....|.
  Fly   577 FAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAKGGRGKK 641

  Fly   803 ----STLSSNIRTQLQTLLAIVKHRRSHYVFCIKPNEGKQPHQFDMALVQHQVRYMSLMPLVHLC 863
                :|:||..:.||.:|:..::..:.|:|.||.|||.|||...|..||.||:....::..:.:|
  Fly   642 GGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRIC 706

  Fly   864 RTGHCYHLLHVKFFHRYKLLNSLTWPHFHGGSQVEGIA--LIIRNLPLPSAEFTIGTKNVFVRSP 926
            |.|....:::..|..|||::    .|....|.:.:..|  :||:.:.||..::.:|...||.|: 
  Fly   707 RKGFPNRMMYPDFKMRYKIM----CPKLLQGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRA- 766

  Fly   927 RTVYELEQFRRLRISELAVLIQTMFRMYHARKRFQRMRHSQMIISSA---------WRTWRECRF 982
            ..:.::|:||..|:.::...:|...|.|.:||.|::::..::.:...         .|||     
  Fly   767 GVLGQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTW----- 826

  Fly   983 GIPFTGRRHLWS----LYRVAREEYRSLKYKRQVRWAIDIIGRYYRQWKIRQFLLTIPLRL---P 1040
              |:   ..||.    |..|:|.|....:.:.:.:.|.::   :..:.|:|:.|..:..:|   .
  Fly   827 --PW---YKLWQKVKPLLNVSRIEDEIARLEEKAKKAEEL---HAAEVKVRKELEALNAKLLAEK 883

  Fly  1041 PNTLSPLSTE------WPVAPAFLA----DASRHLRSIYHRWKCYIYRNSFDQTARNRM---REK 1092
            ...|..||.|      :....|.|.    |....||.|..|.       :.::.|||::   ::|
  Fly   884 TALLDSLSGEKGALQDYQERNAKLTAQKNDLENQLRDIQERL-------TQEEDARNQLFQQKKK 941

  Fly  1093 VTASI--IFKD--------RKASYGRS------------VGHPFVGDYVRLRHNQQWKKICAETN 1135
            ....|  :.||        :||...::            :.|.   |.:..:.|:: ||:..|||
  Fly   942 ADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIAHQ---DELINKLNKE-KKMQGETN 1002

  Fly  1136 ----DQYVVFADIINKIARSSGKFVPILLVLSTS 1165
                ::.....|.||.:.:...|....|..|..|
  Fly  1003 QKTGEELQAAEDKINHLNKVKAKLEQTLDELEDS 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo95ENP_001027208.1 Motor_domain 19..>118 CDD:277568 36/104 (35%)
Motor_domain 403..924 CDD:277568 171/575 (30%)
Myosin_TH1 1092..1267 CDD:283635 21/100 (21%)
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832
MYSc 81..777 CDD:214580 223/984 (23%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 218/959 (23%)
Myosin_tail_1 842..1897 CDD:279860 42/209 (20%)
V_Alix_like 1557..1877 CDD:187408
ATP-synt_B <1671..1771 CDD:304375
TMPIT 1739..>1825 CDD:285135
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466285
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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