DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo95E and Myo5a

DIOPT Version :10

Sequence 1:NP_001027208.1 Gene:Myo95E / 2768680 FlyBaseID:FBgn0039157 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001423326.1 Gene:Myo5a / 25017 RGDID:3143 Length:1877 Species:Rattus norvegicus


Alignment Length:1091 Identity:239/1091 - (21%)
Similarity:390/1091 - (35%) Gaps:370/1091 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IGTWDSVLLENLSEDSFINNIHQRY-KRDHIYTYIGTSVVALNPYHHISEHSLDNVRNYGDKGIF 68
            :|..|...|..|.|.:.::|:..|: ....||||.|..:||:|||..:..:..|.:..|..:.:.
  Rat    69 VGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMG 133

  Fly    69 QLPPHIYGLTNLAYQSLKDQSEDQCVLLTGESGAGKTETFKMIVNFLTHIQDRSHCPPTPNVLRK 133
            .:.|||:.:...||:.:.....:|.::::||||||||                            
  Rat   134 DMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKT---------------------------- 170

  Fly   134 QSSTSSASGLVMHAHRRASSSCSGTANFIICKNRAENPSGSVSRRQSPSPGPSQRSRTRAESIER 198
                                                                             
  Rat   171 ----------------------------------------------------------------- 170

  Fly   199 QSRRHMREKIVDFDFSHHKSSENISGLPESHAHHMHPTKSCFKHQQTQVSACTAMPAAAKGSPKY 263
                                                            |||            ||
  Rat   171 ------------------------------------------------VSA------------KY 175

  Fly   264 AVPTVYGGCRQCGHSKCVRAQSLEKEERDDLRGSNCRLSTIATATTNPAHPHRGSCSNLMRQHST 328
            |                                                          ||..:|
  Rat   176 A----------------------------------------------------------MRYFAT 182

  Fly   329 ESQPERERDRSSLMGSTQRISLYDAHKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHKSPTQRMR 393
            .|            ||..     :|:...|||...|                             
  Rat   183 VS------------GSAS-----EANVEEKVLASNP----------------------------- 201

  Fly   394 ECVTCADVFLEAMGNACTLKNNNSSRYGKLFDIEIDFKGDPMGVHITHYMLEKTRITDPIIGERN 458
                    .:|::|||.|.:|:||||:||..:|..|.:...:|.::..|:|||:|:......|||
  Rat   202 --------IMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERN 258

  Fly   459 FHIFYQLLLGADLQLLKSLKLYRNVEKYELLR--NTTAME--EDRMNFHYTKRSLDVLGLSCEES 519
            :||||||...|.|...|.|:| .|.:.:...:  .:..:|  :|.....:|:::..:||:|....
  Rat   259 YHIFYQLCASAKLPEFKMLRL-GNADSFHYTKQGGSPMIEGVDDAKEMAHTRQACTLLGISESYQ 322

  Fly   520 NSIFRVIAVVLKLGNFIFVPITNIDGTEGCQVSNVYE-VQETAQLLNMEAQILINCLTRANSTNS 583
            ..|||::|.:|.|||..|..    ..::.|.:...:| :.....|:.::.:.:.:.|.. ....:
  Rat   323 MGIFRILAGILHLGNVGFAS----RDSDSCTIPPKHEPLIIFCDLMGVDYEEMCHWLCH-RKLAT 382

  Fly   584 AQEDVGCEMDARQAATNRNTLCRTLYSRLFTWLVNKINESLKSTQREKN-LALLDFYGFEALDHN 647
            |.|.....:...||...|:.|.:.:|::||.|:|..:|::|.|..::.: :.:||.||||..:.|
  Rat   383 ATETYIKPISKLQATNARDALAKHIYAKLFNWIVGHVNQALHSAVKQHSFIGVLDIYGFETFEIN 447

  Fly   648 SFEQFAINYSAEKIHQNFVFHVLRSEQELYIREGLEWSRIDYFDNESICELIDKPSYGILSLINE 712
            |||||.|||:.||:.|.|..||.:.|||.|::|.:.|:.||::||:....||:. ..|||.|::|
  Rat   448 SFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIES-KLGILDLLDE 511

  Fly   713 ------------------PHLNSNDALLLRVQQCCAGHPNFMTTGSNSMCFQIRHYASVVNYSIH 759
                              .|||.           ||   .|.....::..|.|:|:|..|.|...
  Rat   512 ECKMPKGTDDTWAQKLYNTHLNK-----------CA---LFEKPRMSNKAFIIKHFADKVEYQCE 562

  Fly   760 RFLEKNSDMLPKYISAAFYQSKLSLVQSLFPE---------------------------GNPRRQ 797
            .|||||.|.:.:........||..::..||.:                           |.|.:.
  Rat   563 GFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAISPTSATSSGRTPLTRVPVKPTKGRPGQT 627

  Fly   798 VTKKPSTLSSNIRTQLQTLLAIVKHRRSHYVFCIKPNEGKQPHQFDMALVQHQVRYMSLMPLVHL 862
            ..:...|:....|..|..|:..:.....|||.|||||:.|.|..||......|:|...::..:.:
  Rat   628 AKEHKKTVGLQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRI 692

  Fly   863 CRTGHCYHLLHVKFFHRYKLL----NSLTWPHFHGGSQVEGIALIIRNLPLPSAEFTIGTKNVFV 923
            ...|......:.:||.||::|    :.|       |.:.:....::..|.|...::..|...:|.
  Rat   693 SAAGFPSRWTYQEFFSRYRVLMKQKDVL-------GDRKQTCQNVLEKLILDKDKYQFGKTKIFF 750

  Fly   924 RSPRTVYELEQFRRLRISELAVLIQTMFRMYHARKRFQRMRHSQMIISSAWRTWRECRFGIPFTG 988
            |:.:..| ||:.|..::....:.||...|.:..|||:..|:.:.:.:....|.: :.|....|..
  Rat   751 RAGQVAY-LEKLRADKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGY-QARCYAKFLR 813

  Fly   989 R-------RHLWSLYRVAREEYRSLKYKRQVRWAIDIIGRYYRQWKIRQFL 1032
            |       :..|.:|.|.|      |||  :|.|..|:.:.|    :|.:|
  Rat   814 RTKAATTIQKYWRMYVVRR------KYK--IRRAATIVLQSY----LRGYL 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo95ENP_001027208.1 Motor_domain 3..>123 CDD:473979 33/118 (28%)
Motor_domain <403..937 CDD:473979 164/588 (28%)
Myosin_TH1 1092..1288 CDD:461801
Myo5aNP_001423326.1 COG5022 7..1445 CDD:227355 239/1091 (22%)
MYSc_Myo5 83..751 CDD:276831 205/960 (21%)
Myo5a_CBD 1503..1877 CDD:271262
Blue background indicates that the domain is not in the aligned region.

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