DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38c and ATMPK13

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001030990.1 Gene:ATMPK13 / 837303 AraportID:AT1G07880 Length:363 Species:Arabidopsis thaliana


Alignment Length:327 Identity:133/327 - (40%)
Similarity:191/327 - (58%) Gaps:8/327 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHMNHRNVISLLNVFHPPA 90
            :|.|::|.|.......|....|:|::...|:...|||.|.|||:||.||:|.|||.:.::...|.
plant    39 IGRGAYGIVCCATNSETNEEVAIKKIANAFDNRVDAKRTLREIKLLSHMDHDNVIKIKDIIELPE 103

  Fly    91 HNMMEFQQVYLVTHLMDADLHRYSRS-KRMSDQEIRIILYQILRGLKYIHSAGVVHRDLKPCNIA 154
            ..  .|:.||:|..|||.|||:..|| :.::|...:..||||||||||||||.|:||||||.|:.
plant   104 KE--RFEDVYIVYELMDTDLHQIIRSTQTLTDDHCQYFLYQILRGLKYIHSANVLHRDLKPSNLV 166

  Fly   155 VNGNSEVRILDFGLSRMC--ADKMTDHVGTMWYLAPEIIFLRGQYTKAIDVWSVGCILAELITDR 217
            :|.|.:::|.||||:|..  .:.||::|.|.||.|||::....:||.|||:||||||..|::...
plant   167 LNTNCDLKICDFGLARTSNETEIMTEYVVTRWYRAPELLLNSSEYTGAIDIWSVGCIFMEILRRE 231

  Fly   218 VLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYLEGYPLRQRCDFHHLFMGYDVQAIDLM 282
            .||.|::||.|::.:..::|:|....:..:..:.:|.|::..|..|:..|...|......|:||.
plant   232 TLFPGKDYVQQLKLITELLGSPDDSDLDFLRSDNARKYVKQLPHVQKQSFREKFPNISPMALDLA 296

  Fly   283 EKMLEMVPEKRITAAEAMLHPYLRDLIEPHHHAEDTAPV-YDQNFENMVLPVKCWKELVSHEIRN 346
            ||||...|.||||..||:..|||..|.|.:.  |.|.|. :..:||...|..:..||||..|..:
plant   297 EKMLVFDPSKRITVDEALKQPYLASLHEINE--EPTCPTPFSFDFEETALDEQDIKELVWRESLH 359

  Fly   347 FR 348
            |:
plant   360 FK 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 133/327 (41%)
S_TKc 20..305 CDD:214567 117/281 (42%)
ATMPK13NP_001030990.1 STKc_TEY_MAPK 26..362 CDD:143363 133/327 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm974
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.