DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and Mapk12

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_068514.1 Gene:Mapk12 / 60352 RGDID:70975 Length:367 Species:Rattus norvegicus


Alignment Length:346 Identity:144/346 - (41%)
Similarity:224/346 - (64%) Gaps:3/346 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FVRVAINESLWEFPDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREI 68
            |.|..:.::.||...:|:.::.:|.|::|.|.......|.|..|:|:|.|||:.|..||..|||:
  Rat    11 FYRQEVTKTAWEVRAVYQDLQPVGSGAYGAVCSAVDSRTGNKVAIKKLYRPFQSELFAKRAYREL 75

  Fly    69 RLLKHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEIRIILYQILR 133
            ||||||.|.|||.||:|| .|...:.:|...|||...|..||.:..:.:.:|:..|:.::||:|:
  Rat    76 RLLKHMRHENVIGLLDVF-TPDETLDDFTDFYLVMPFMGTDLGKLMKHETLSEDRIQFLVYQMLK 139

  Fly   134 GLKYIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCADKMTDHVGTMWYLAPEIIFLRGQYT 198
            ||||||:|||:||||||.|:|||.:.|::||||||:|....:||.:|.|.||.|||:|....:||
  Rat   140 GLKYIHAAGVIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYT 204

  Fly   199 KAIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYLEGYPLRQ 263
            :.:|:||||||:||:||.::||:|.:::.|::.::.:.|||..||:..:....::||:||.|..:
  Rat   205 QTVDIWSVGCIMAEMITGKILFKGNDHLDQLKEIMKVTGTPPPEFVQKLQSAEAKNYMEGLPELE 269

  Fly   264 RCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEPHHHAEDTAPVYDQNFEN 328
            :.||..:......||::|:||||.:..|:|:|||||:.|||...|.:...  |..|..||.:|::
  Rat   270 KKDFASVLTNASPQAVNLLEKMLVLDAEQRVTAAEALAHPYFESLRDTED--EPKAQKYDDSFDD 332

  Fly   329 MVLPVKCWKELVSHEIRNFRP 349
            :...::.||.:...|:.:|:|
  Rat   333 VDRTLEEWKRVTYKEVLSFKP 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 143/344 (42%)
S_TKc 20..305 CDD:214567 128/284 (45%)
Mapk12NP_068514.1 STKc_p38gamma 11..353 CDD:143385 143/344 (42%)
TXY 183..185 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324618at33208
OrthoFinder 1 1.000 - - FOG0000533
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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