DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38c and mapk10

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001305248.1 Gene:mapk10 / 569698 ZFINID:ZDB-GENE-051120-117 Length:486 Species:Danio rerio


Alignment Length:372 Identity:138/372 - (37%)
Similarity:208/372 - (55%) Gaps:36/372 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EFVRVAINESLWEFPDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYRE 67
            :|..|.:.:|.:.....|:.::.:|.|:.|.|........:...|:|:|.|||:.:..||..|||
Zfish    47 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAGYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 111

  Fly    68 IRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEIRIILYQIL 132
            :.|:|.:||:|:||||||| .|..::.|||.||||..||||:|.:..:.: :..:.:..:|||:|
Zfish   112 LVLMKCVNHKNIISLLNVF-TPQKSLEEFQDVYLVMELMDANLCQVIQME-LDHERMSYLLYQML 174

  Fly   133 RGLKYIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCADK--MTDHVGTMWYLAPEIIFLRG 195
            .|:|::||||::||||||.||.|..:..::||||||:|.....  ||.:|.|.:|.|||:|...|
Zfish   175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239

  Fly   196 QYTKAIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYLEGYP 260
             |.:.:|:||||||:.|::..::||.|.:|:.|...:|..:|||:.||:..: ....|||:|..|
Zfish   240 -YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPSPEFMKKL-QPTVRNYVENRP 302

  Fly   261 LRQRCDFHHLFMGYDV--------------QAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEP 311
            ......|..||.  |.              ||.||:.|||.:.|.|||:..||:.|||:....:|
Zfish   303 KYAGLTFPKLFP--DCLFPADSEHNKLKASQARDLLSKMLIIDPAKRISVDEALQHPYINVWYDP 365

  Fly   312 HHHAEDTA-----------PVYDQNFENMVLPVKCWKELVSHEIRNF 347
               ||..|           .:||:..:.....:..||||:..|:.||
Zfish   366 ---AEVEAARNQQISMPPPQIYDKQLDEREHSIDEWKELIYKEVMNF 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 138/371 (37%)
S_TKc 20..305 CDD:214567 121/300 (40%)
mapk10NP_001305248.1 STKc_JNK 63..406 CDD:270840 132/351 (38%)
S_TKc 64..359 CDD:214567 121/300 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.