DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and srpk3

DIOPT Version :10

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_694973.8 Gene:srpk3 / 566605 ZFINID:ZDB-GENE-101025-2 Length:731 Species:Danio rerio


Alignment Length:175 Identity:49/175 - (28%)
Similarity:71/175 - (40%) Gaps:44/175 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 VRILDFGLSRMCADKMTDHVGTMWYLAPEIIFLRGQYTKAIDVWSVGCILAELITDRVLFR---G 222
            ::|.|.|.:.......|:.:.|..|.|.|:: :..:|....|:||..|:..||.|...||.   |
Zfish   569 IKIADLGNACWVHKHFTEDIQTRQYRALEVL-IGAEYGPPADIWSTACMAFELATGDYLFEPHSG 632

  Fly   223 ENYV---SQIRCLINIMGTPTREFITGISMERSRNY----------------------LEGY--P 260
            |:|.   ..|..:|.::|.....|  .:|...||.|                      ||.|  |
Zfish   633 EDYTRDEDHIAHIIELLGAIPPHF--ALSGRYSREYFNRRGELRHIANLKPWGLFEVLLEKYEWP 695

  Fly   261 LRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYL 305
            |.|...|.           |.:..|||.:||||.|||:.:.||::
Zfish   696 LDQAAQFS-----------DFLLTMLEFIPEKRATAAQCLQHPWI 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 49/175 (28%)
srpk3XP_694973.8 None

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