DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and Mapk6

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_056621.4 Gene:Mapk6 / 50772 MGIID:1354946 Length:720 Species:Mus musculus


Alignment Length:380 Identity:107/380 - (28%)
Similarity:178/380 - (46%) Gaps:64/380 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHMNHRNVISLLN 84
            |..::.||.|..|.|........:...|:|:::  ....:..|...|||::::.::|.|::.:..
Mouse    20 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV--LTDPQSVKHALREIKIIRRLDHDNIVKVFE 82

  Fly    85 VFHPPAH-------NMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEIRIILYQILRGLKYIHSAG 142
            :..|...       ::.|...||:|...|:.||........:.::..|:.:||:||||||||||.
Mouse    83 ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN 147

  Fly   143 VVHRDLKPCNIAVNGNSEV-RILDFGLSRMCADKMTDHVG-------TMWYLAPEIIFLRGQYTK 199
            |:||||||.|:.:|....| :|.||||:|: .|....|.|       |.||.:|.::.....|||
Mouse   148 VLHRDLKPANLFINTEDLVLKIGDFGLARI-MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK 211

  Fly   200 AIDVWSVGCILAELITDRVLFRGENYVSQIRCLIN----IMGTPTREFITGISMERSRNYLEGY- 259
            |||:|:.|||.||::|.:.||.|.:.:.|::.:::    :.....:|.::.|.:....:..|.: 
Mouse   212 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILDSIPVVHEEDRQELLSVIPVYIRNDMTEPHR 276

  Fly   260 PLRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLR------------------ 306
            ||.|      |..|...:|:|.:|::|...|..|:||.||:.|||:.                  
Mouse   277 PLTQ------LLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPTDEPISSHPFHIE 335

  Fly   307 ----DLI---EPHHHAEDTAPVYDQNFENMVLPVKCWKELVSHEIRNFRPDQLDL 354
                |::   |.|.|..:....:|..|.....|:.          .||..|::.|
Mouse   336 DEVDDILLMDETHSHIYNWERYHDCQFSEHDWPIH----------NNFDIDEVQL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 105/373 (28%)
S_TKc 20..305 CDD:214567 95/304 (31%)
Mapk6NP_056621.4 STKc_MAPK4_6 14..355 CDD:143359 100/343 (29%)
SEG motif 189..191 0/1 (0%)
FRIEDE motif 332..337 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 638..657
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 700..720
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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