DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and Mapk3

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_038944453.1 Gene:Mapk3 / 50689 RGDID:3046 Length:406 Species:Rattus norvegicus


Alignment Length:364 Identity:132/364 - (36%)
Similarity:206/364 - (56%) Gaps:40/364 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHMNHRNVISLLN 84
            |..::::|.|::|.|:.......:...|:|:: .|||.:...:.|.|||::|....|.|||.:.:
  Rat    43 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI-SPFEHQTYCQRTLREIQILLRFRHENVIGIRD 106

  Fly    85 VFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEIRIILYQILRGLKYIHSAGVVHRDLK 149
            :...|....|  :.||:|..||:.||::..:|:::|:..|...||||||||||||||.|:|||||
  Rat   107 ILRAPTLEAM--RDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLK 169

  Fly   150 PCNIAVNGNSEVRILDFGLSRMCADKMTDHVG-------TMWYLAPEIIFLRGQYTKAIDVWSVG 207
            |.|:.:|...:::|.||||:|: ||...||.|       |.||.||||:.....|||:||:||||
  Rat   170 PSNLLINTTCDLKICDFGLARI-ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 233

  Fly   208 CILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYLEGYPLRQRCDFHHLFM 272
            |||||::::|.:|.|::|:.|:..::.|:|:|::|.:..|...::||||:..|.:.:..:..||.
  Rat   234 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFP 298

  Fly   273 GYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEPHHHAE------------DTAPV---- 321
            ..|.:|:||:::||...|.||||..||:.||||....:|.....            ...||    
  Rat   299 KSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEVSRPPAAGRGISVPSVRPVPYCL 363

  Fly   322 -----------YDQNFENMVLPVKCWKELVSHEIRNFRP 349
                       :|...::  ||.:..|||:..|...|:|
  Rat   364 CPQPVAEEPFTFDMELDD--LPKERLKELIFQETARFQP 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 131/362 (36%)
S_TKc 20..305 CDD:214567 118/291 (41%)
Mapk3XP_038944453.1 STKc_ERK1_2_like 37..397 CDD:270839 130/359 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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