DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and mapk4

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_998638.1 Gene:mapk4 / 406782 ZFINID:ZDB-GENE-040426-2835 Length:674 Species:Danio rerio


Alignment Length:337 Identity:104/337 - (30%)
Similarity:169/337 - (50%) Gaps:43/337 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDA---KGTYREIRLLKHMNHRNVIS 81
            |:.:|.||.|:.|.|.....|.:....|:|:|:.     .||   |...||:::.:.:.|.||:.
Zfish    19 YQDLRPLGTGASGLVLSALDRRSGLRVAVKKLVM-----RDAVSVKHALREVKITRRLQHENVVR 78

  Fly    82 LLNVF----HPPAHNMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEIRIILYQILRGLKYIHSAG 142
            :.:|.    ||...::.....:|:|...|:.||.|......:..:...::.||:|||||:||||.
Zfish    79 VYDVLGSSGHPLPRDLTHVAAIYIVQECMETDLARLLEQGPLPAEHATLLFYQLLRGLKFIHSAN 143

  Fly   143 VVHRDLKPCNIAVNGNSE-VRILDFGLSRMCADKMTDHVG-------TMWYLAPEIIFLRGQYTK 199
            |:||||||.||.:|.... ::|.||||:|: .|....|.|       |.||.:|.::.....|||
Zfish   144 VLHRDLKPANIFINTEQMLLKIGDFGLARI-VDPHYSHKGYLSEGMVTKWYRSPRLLLSPNNYTK 207

  Fly   200 AIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYL-------- 256
            |||:|:.||||||::|.|:||.|.:.:.|::.:::.:         .:..|..|..|        
Zfish   208 AIDMWAAGCILAEMLTGRMLFAGAHELEQMQLILDTV---------PVIREEDRQELLRVMPSLV 263

  Fly   257 -EGYPLRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEPHHHAEDTAP 320
             .|:.:|:  .|..|....:.:|||.:|.:|...|..|:||..|:..|:|:....|........|
Zfish   264 GHGWQIRR--SFRDLMPEVEDKAIDFLESILTFNPMDRLTAEAALCQPFLQRYSCPQDEPVSLQP 326

  Fly   321 --VYDQNFENMV 330
              :.|:..:::|
Zfish   327 FRIEDELEDSLV 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 104/337 (31%)
S_TKc 20..305 CDD:214567 99/308 (32%)
mapk4NP_998638.1 STKc_MAPK4_6 13..352 CDD:143359 104/337 (31%)
S_TKc 19..311 CDD:214567 99/308 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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