DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and nlk1

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_998121.1 Gene:nlk1 / 405892 ZFINID:ZDB-GENE-040701-1 Length:475 Species:Danio rerio


Alignment Length:351 Identity:122/351 - (34%)
Similarity:194/351 - (55%) Gaps:36/351 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHMNHRNVIS 81
            ||     |.:|.|:||.|..|.........|:|::...|:.....|..:||:|:|....|.||:|
Zfish    90 PD-----RPIGYGAFGVVWSVTDPRDGRKVALKKMPNVFQNLVSCKRVFRELRMLCFFKHDNVLS 149

  Fly    82 LLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKR-MSDQEIRIILYQILRGLKYIHSAGVVH 145
            .|::..||..:.  |:::|::|.||.:|||:...|.: ::...|::.||||||||||:||||::|
Zfish   150 ALDILQPPQIDC--FEEIYVITELMQSDLHKVIVSPQPLTTDHIKVFLYQILRGLKYLHSAGILH 212

  Fly   146 RDLKPCNIAVNGNSEVRILDFGLSRM----CADKMTDHVGTMWYLAPEIIFLRGQYTKAIDVWSV 206
            ||:||.|:.||.|..::|.||||:|:    .:..||..|.|.:|.|||::.....||.:||||||
Zfish   213 RDIKPGNLLVNSNCLLKICDFGLARVEEPDPSRHMTQEVVTQYYRAPEVLMGCQHYTSSIDVWSV 277

  Fly   207 GCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYLEGYPLRQRCDFHHLF 271
            |||.|||:..|:||:.::.:.|:..:.:::|||....:|. :.|.:|.::...| .:......|:
Zfish   278 GCIFAELLGRRILFQAQSPIQQLDLITDLLGTPPLSAMTS-ACEGARAHILRGP-HKPPSLSVLY 340

  Fly   272 M---GYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEPHH---------------HAEDT 318
            |   |...:|:.|:.:||...|.|||:.::|:.||||.:....:|               :..|.
Zfish   341 MLSDGATHEAVHLLCRMLVFDPAKRISGSDALSHPYLDEGRLRYHTCMCKCCYSVPSGRVYTRDF 405

  Fly   319 APVYDQ----NFENMVLPVKCWKELV 340
            .|..|:    |:|..:..|...|||:
Zfish   406 EPPADRPFSHNYEQSMHSVWQGKELI 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 122/351 (35%)
S_TKc 20..305 CDD:214567 108/292 (37%)
nlk1NP_998121.1 STKc_NLK 87..458 CDD:173748 122/351 (35%)
S_TKc 89..377 CDD:214567 110/295 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575938
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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