DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38c and F09C12.2

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_872069.1 Gene:F09C12.2 / 353395 WormBaseID:WBGene00017277 Length:418 Species:Caenorhabditis elegans


Alignment Length:350 Identity:110/350 - (31%)
Similarity:186/350 - (53%) Gaps:35/350 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHMNHRNVISLLNVFHPPA 90
            ||.|:||.|.:..........|:|::.|.|:.:..||...||||:.:.::|.|:|:..:|.    
 Worm    50 LGAGAFGVVCRAIDSKLNKQVAIKKITRVFKNQSTAKCALREIRITRELSHENIINSTDVL---- 110

  Fly    91 HNMMEF---QQVYLVTHLMDADLHRYSRSKR-MSDQEIRIILYQILRGLKYIHSAGVVHRDLKPC 151
              |.|.   |.:|:|..||:.||....:|.: ::::..:...||||:||||:||||::||||||.
 Worm   111 --MRESGSGQDIYIVMDLMETDLLSVLKSNQTLNEKHFQYFFYQILKGLKYLHSAGIIHRDLKPA 173

  Fly   152 NIAVNGNSEVRILDFGLSRM---------------CADKMTDHVGTMWYLAPEIIFLRGQYTKAI 201
            |:.:|.:..::|.|||:||.               .:..::.:|.|:||.||||:...|:|...:
 Worm   174 NLLLNEDCSLKIADFGMSRSGPSTKTTPNTSPNAHISGDLSQYVSTLWYRAPEILLSMGEYDTQV 238

  Fly   202 DVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYLEGYPLRQRCD 266
            |:||.||||||::..|.:|.|.:..|||:.||..:|||..:.|..|.....|:|:..:..:....
 Worm   239 DIWSAGCILAEMLLLRPIFTGTDSYSQIQLLIEYLGTPDEQVIRRIKSPSIRDYISSFGPKTPLP 303

  Fly   267 FHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEPHHHAEDTAPVYDQNF-ENMV 330
            |..:|....::|.:::.|||::.|.||.:|.:.:..|:::     |.|.....|....:. :|::
 Worm   304 FTAMFPNASIEARNIVSKMLQISPWKRFSAEQLLEEPFVK-----HWHTVKNEPSCPNHIRQNLL 363

  Fly   331 LPVKCWKELV----SHEIRNFRPDQ 351
            ...|...:::    ..|:|.|...|
 Worm   364 ETAKYEGDVIIKGLQEEVRIFEKKQ 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 109/346 (32%)
S_TKc 20..305 CDD:214567 101/297 (34%)
F09C12.2NP_872069.1 STKc_MAPK 44..355 CDD:270828 104/315 (33%)
S_TKc 44..342 CDD:214567 101/297 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.