DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38c and pmk-1

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_501365.1 Gene:pmk-1 / 191743 WormBaseID:WBGene00004055 Length:377 Species:Caenorhabditis elegans


Alignment Length:345 Identity:152/345 - (44%)
Similarity:215/345 - (62%) Gaps:9/345 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VAINESLWEFPDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLL 71
            |.:|.|:|..|:.|..:..:|.|::|.|.......:....|:|:..|||:....|:.||||:|||
 Worm    22 VELNRSVWVVPNYYINLTPIGTGAYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARRTYRELRLL 86

  Fly    72 KHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEIRIILYQILRGLK 136
            :.|.|.|:|.||:|| .|..|:.:.:.||.|:.||.|||....:.:|::|..|:.::||||||||
 Worm    87 RCMCHENIIDLLDVF-TPNENVNDIEDVYFVSMLMGADLSNILKIQRLNDDHIQFLVYQILRGLK 150

  Fly   137 YIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCADKMTDHVGTMWYLAPEIIFLRGQYTKAI 201
            |||||.::||||||.|||||.:.|::||||||:|....:||.:|.|.||.||||:.....||:.:
 Worm   151 YIHSADIIHRDLKPSNIAVNEDCELKILDFGLARQTDSEMTGYVATRWYRAPEIMLNWMHYTQTV 215

  Fly   202 DVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYLEGYPLRQRCD 266
            ||||||||||||||.:.||.|.:::.|:..::::.|||..||:..||.|.:|||:...|...|.|
 Worm   216 DVWSVGCILAELITGKTLFPGSDHIDQLTRIMSVTGTPDEEFLKKISSEEARNYIRNLPKMTRRD 280

  Fly   267 FHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEPHHHAEDTAPV---YDQNFEN 328
            |..||.....|||||:||||.:.|::|.||.|||.|.||     ..:|.|...|:   .|.|.:.
 Worm   281 FKRLFAQATPQAIDLLEKMLHLDPDRRPTAKEAMEHEYL-----AAYHDETDEPIAEEMDLNDDV 340

  Fly   329 MVLPVKCWKELVSHEIRNFR 348
            ....:..||:::..||.:|:
 Worm   341 RADTIDEWKKIIWEEISDFQ 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 152/345 (44%)
S_TKc 20..305 CDD:214567 135/284 (48%)
pmk-1NP_501365.1 STKc_p38 19..361 CDD:143356 152/345 (44%)
S_TKc 35..319 CDD:214567 135/284 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324618at33208
OrthoFinder 1 1.000 - - FOG0000533
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.