DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and pmk-2

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_741457.2 Gene:pmk-2 / 177611 WormBaseID:WBGene00004056 Length:402 Species:Caenorhabditis elegans


Alignment Length:361 Identity:147/361 - (40%)
Similarity:223/361 - (61%) Gaps:7/361 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PE-FVRVAINESLWEFPDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTY 65
            || :..|.:|::.|..|..|..::.||.|::|.|.......|.:..|:|:..|||:....||.||
 Worm    30 PEGYHEVELNKTKWVLPQWYNSLKPLGEGAYGVVCTAEYEPTGDRVAIKKFFRPFQSTIHAKRTY 94

  Fly    66 REIRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEIRIILYQ 130
            ||::||:.:.|.||:.:::||.|.. :......||.|:.||.:||....:.:|::|::|::::||
 Worm    95 RELKLLRTLQHDNVLEMIDVFTPDP-DASSLNNVYFVSVLMGSDLQNIMKIQRLTDEQIQLLIYQ 158

  Fly   131 ILRGLKYIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCADKMTDHVGTMWYLAPEIIFLRG 195
            :|||||||||||::||||||.|||||...||:||||||:|....:||.:|.|.||.||||:....
 Worm   159 VLRGLKYIHSAGIIHRDLKPSNIAVNERCEVKILDFGLARAQDAEMTGYVATRWYRAPEIMLNWM 223

  Fly   196 QYTKAIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISMERSRNYLEGYP 260
            .||:.:||||||||||||::.|.||.|::::.|:..:::::|||..||.:.|..|.:|||::...
 Worm   224 HYTQTVDVWSVGCILAELVSGRPLFPGDDHIDQLTKIMSVVGTPKEEFWSKIQSEEARNYIKNRS 288

  Fly   261 LRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEPHHH--AEDT---AP 320
            ...|.||..||......|::|:|.||.:.|::||:.:.|:.|.|||:...|:..  |.||   :.
 Worm   289 PIIRQDFVTLFPMASPYALELLEMMLILDPDRRISVSSALRHDYLREYSVPNDEPVAMDTVINSI 353

  Fly   321 VYDQNFENMVLPVKCWKELVSHEIRNFRPDQLDLHF 356
            |.....|.....:..|:||:.:|||.|:.....|.|
 Worm   354 VTIDPAEERATTLSDWRELIWNEIRLFQNSARRLSF 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 143/349 (41%)
S_TKc 20..305 CDD:214567 123/284 (43%)
pmk-2NP_741457.2 STKc_p38 33..381 CDD:143356 142/348 (41%)
S_TKc 49..333 CDD:214567 123/284 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324618at33208
OrthoFinder 1 1.000 - - FOG0000533
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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