DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and pmk-3

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001379550.1 Gene:pmk-3 / 177610 WormBaseID:WBGene00004057 Length:474 Species:Caenorhabditis elegans


Alignment Length:373 Identity:134/373 - (35%)
Similarity:207/373 - (55%) Gaps:38/373 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FVRVAINESLWEFPDIYEF----VRFLGGGSFGQVAK---VRLRGTENYFAMKRLMRPFEREEDA 61
            |..|.|....:..|:.|:.    :.:|||||||.|.|   |...|...|.|:|::..||.....|
 Worm    98 FQFVMIRNITFAIPEGYDVEPNSIEYLGGGSFGNVIKTSAVCRDGLRRYVAIKKMREPFFDPHHA 162

  Fly    62 KGTYREIRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKR------MS 120
            :..:||.:||:.|.|.|:|..|:::.|...|  :|:.||:||......|::..:.:|      ::
 Worm   163 RRIFRETKLLQLMRHDNIICALDIYTPDEEN--DFRDVYVVTEFAGRSLYQILKQQRDYGRRVLT 225

  Fly   121 DQEIRIILYQILRGLKYIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCADK---MTDHVGT 182
            |:.|:.|:|||:|.|||||||.::||||||.|:|:..:|::.||||||:|....|   :|.:|.|
 Worm   226 DEHIKFIIYQIIRALKYIHSANIIHRDLKPGNLALTDDSDLMILDFGLARSLEKKDTSLTQYVQT 290

  Fly   183 MWYLAPEIIFLR-GQYTKAIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITG 246
            .||.:||:|:.: ..||...|:||:|||.|||:|...||.|:...:|.:.:..:.|:|..|.:|.
 Worm   291 RWYRSPEVIYWKIDSYTNLADMWSLGCIAAELLTGEPLFPGDEPNAQYQRITQLCGSPDEELLTK 355

  Fly   247 ISMERS---RNYLEGYPLRQRCDFHHLFMGYDVQA--IDLMEKMLEMVPEKRITAAEAMLHPYLR 306
            |..:.|   :..::.|...:|.:|..:|..::...  |||:||:|.:.||||||..||:.||||.
 Worm   356 IENDNSSAIKAVIQSYTTHKRRNFRDVFSAHNPSEDFIDLLEKLLVLDPEKRITVEEAIQHPYLA 420

  Fly   307 D--LIEPHHHAEDTAPVYDQ----NFENMVLPVKCWKELVSHEIRNFR 348
            :  |.|....|:....:.|.    .||        |::.|..||.|::
 Worm   421 EFSLPEDEPRADHIFDLDDSQARTRFE--------WRDAVWKEIMNYK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 134/373 (36%)
S_TKc 20..305 CDD:214567 117/306 (38%)
pmk-3NP_001379550.1 STKc_p38 102..461 CDD:143356 132/369 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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