DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and Cdk6

DIOPT Version :10

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_034003.1 Gene:Cdk6 / 12571 MGIID:1277162 Length:326 Species:Mus musculus


Alignment Length:308 Identity:103/308 - (33%)
Similarity:164/308 - (53%) Gaps:18/308 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ESLWEFPDIYEFVRFLGGGSFGQVAKVR-LRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHM 74
            :||......||.|..:|.|::|:|.|.| |:....:.|:||:......|.....|.||:.:|:|:
Mouse     4 DSLSRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTSEEGMPLSTIREVAVLRHL 68

  Fly    75 ---NHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRY---SRSKRMSDQEIRIILYQILR 133
               .|.||:.|.:|.  .........::.||...:|.||..|   .....:..:.|:.:::|:||
Mouse    69 ETFEHPNVVRLFDVC--TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131

  Fly   134 GLKYIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCADKM--TDHVGTMWYLAPEIIFLRGQ 196
            ||.::||..||||||||.||.|..:.::::.||||:|:.:.:|  |..|.|:||.|||:: |:..
Mouse   132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL-LQSS 195

  Fly   197 YTKAIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTRE-FITGISMERSRNYLEGYP 260
            |...:|:||||||.||:...:.||||.:.|.|:..:::|:|.|..| :...:::.|     :.:.
Mouse   196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDIIGLPGEEDWPRDVALPR-----QAFH 255

  Fly   261 LRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDL 308
            .:............|....||:.|.|...|.|||:|..|:.|||.:||
Mouse   256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYGALNHPYFQDL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 103/308 (33%)
Cdk6NP_034003.1 STKc_CDK6 11..300 CDD:270846 98/296 (33%)

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