DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38c and Mapk1

DIOPT Version :9

Sequence 1:NP_996277.1 Gene:p38c / 2768679 FlyBaseID:FBgn0267339 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_446294.1 Gene:Mapk1 / 116590 RGDID:70500 Length:358 Species:Rattus norvegicus


Alignment Length:363 Identity:135/363 - (37%)
Similarity:214/363 - (58%) Gaps:32/363 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PEFVRVAINESLWEFPDIYEFVRFLGGGSFGQVA-------KVRLRGTENYFAMKRLMRPFEREE 59
            ||.||    ..:::....|..:.::|.|::|.|.       |||:       |:|:: .|||.:.
  Rat     9 PEMVR----GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRV-------AIKKI-SPFEHQT 61

  Fly    60 DAKGTYREIRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRSKRMSDQEI 124
            ..:.|.|||::|....|.|:|.:.::...|....|  :.||:|..||:.||::..:::.:|:..|
  Rat    62 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM--KDVYIVQDLMETDLYKLLKTQHLSNDHI 124

  Fly   125 RIILYQILRGLKYIHSAGVVHRDLKPCNIAVNGNSEVRILDFGLSRMCADK-------MTDHVGT 182
            ...||||||||||||||.|:||||||.|:.:|...:::|.||||:|: ||.       :|::|.|
  Rat   125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVAT 188

  Fly   183 MWYLAPEIIFLRGQYTKAIDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGI 247
            .||.||||:.....|||:||:|||||||||::::|.:|.|::|:.|:..::.|:|:|::|.:..|
  Rat   189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253

  Fly   248 SMERSRNYLEGYPLRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAMLHPYLRDLIEPH 312
            ...::||||...|.:.:..::.||...|.:|:||::|||...|.|||...:|:.||||....:|.
  Rat   254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 318

  Fly   313 HHAEDTAPV-YDQNFENMVLPVKCWKELVSHEIRNFRP 349
            ......||. :|...::  ||.:..|||:..|...|:|
  Rat   319 DEPIAEAPFKFDMELDD--LPKEKLKELIFEETARFQP 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38cNP_996277.1 STKc_p38 4..349 CDD:143356 132/359 (37%)
S_TKc 20..305 CDD:214567 117/298 (39%)
Mapk1NP_446294.1 STKc_ERK1_2_like 17..351 CDD:270839 129/346 (37%)
Inhibitor-binding 103..109 2/5 (40%)
TXY 183..185 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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