DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p53 and Tp63

DIOPT Version :9

Sequence 1:NP_996267.1 Gene:p53 / 2768677 FlyBaseID:FBgn0039044 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_062094.1 Gene:Tp63 / 246334 RGDID:620863 Length:680 Species:Rattus norvegicus


Alignment Length:512 Identity:105/512 - (20%)
Similarity:184/512 - (35%) Gaps:112/512 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FSLTFNQNTSIVSRSNSRTIFEAFKEFLDFWDIGNE-------VSAESAVRVSSNGAFN-LPQSF 65
            ||...:...|.:|:|...:.|.:.:.|...||...:       :........|.|||.| :..|.
  Rat    29 FSWKESYYRSAMSQSTQTSEFLSPEVFQHIWDFLEQPICSVQPIDLNFVDEPSENGATNKIEISM 93

  Fly    66 GNESNEYAHLATPVDPAYGGNNTNNMM--QFTNNLEILANNNSD-GNNKINACNKFVCHKGT-DS 126
            .....:.:.|:.|:.|.|......|.|  |..|.....:..|:| ..|.:.|.:.:.....| |:
  Rat    94 DCIRMQDSDLSDPMWPQYTNLGLLNGMDQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDA 158

  Fly   127 EDDSTEVDIKEDIPKTVEVSGSELTTEPMAFLQGLNSGNLMQFSQQSVLREMMLQDIQIQANTLP 191
            ...|..:....|.|            .|.:|                        |:..|.::..
  Rat   159 LSPSPAIPSNTDYP------------GPHSF------------------------DVSFQQSSTA 187

  Fly   192 KLENHNIGGYCFSMVLDEPPKSLWMYSIPLNKLYIRMNKAFNVDVQFKSKMPIQPLNLRVFLCF- 255
            |                   .:.|.||..|.|||.::.|...:.::..:..| |...:|....: 
  Rat   188 K-------------------SATWTYSTELKKLYCQIAKTCPIQIKVMTPPP-QGAVIRAMPVYK 232

  Fly   256 -SNDVSAPVVRCQNHLSVEPLTANNAKMRESLLRSENPNSVYCGNAQGKGISE----RFSVVVPL 315
             :..|:..|.||.||................|:|.|       ||:..:.:.:    |.||:||.
  Rat   233 KAEHVTEVVKRCPNHELSREFNEGQIAPPSHLIRVE-------GNSHAQYVEDPITGRQSVLVPY 290

  Fly   316 NMSRSVTRSGLTRQTLAFKFVCQNSCIG---RKETSLVFCLEKACGDIVGQHVIHVKICTCPKRD 377
                ...:.|....|:.:.|:|.:||:|   |:...::..||...|.::|:.....:||.||.||
  Rat   291 ----EPPQVGTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRD 351

  Fly   378 RIQDERQLNSKKRKSVPEAAEEDEPSKVRRCIAIKTEDTESNDSRDCDDSAAEWNVSRTPDGDYR 442
            |..||   :|.:::.|.::|:..:.:|  |.....|...:....:.          .|:|| |..
  Rat   352 RKADE---DSIRKQQVSDSAKNGDGTK--RPFRQNTHGIQMTSIKK----------RRSPD-DEL 400

  Fly   443 LAITCPNKEW------LLQSIEGM--IKEAAAEVLRNPNQENLRRHANKLLSLKKRA 491
            |.:....:|.      :.:|:|.|  :.:...|..|...|:..:....|..|::.::
  Rat   401 LYLPVRGRETYEMLLKIKESLELMQYLPQHTIETYRQQQQQQHQHLLQKQTSMQSQS 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p53NP_996267.1 P53 203..383 CDD:176262 47/188 (25%)
P53_C 429..495 CDD:288471 14/71 (20%)
Tp63NP_062094.1 Transcription activation. /evidence=ECO:0000250 1..107 16/77 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..171 9/48 (19%)
P53 163..358 CDD:279242 55/264 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..393 10/56 (18%)
Interaction with HIPK2. /evidence=ECO:0000250 352..388 9/40 (23%)
P53_tetramer 391..431 CDD:285011 9/50 (18%)
Oligomerization. /evidence=ECO:0000250 394..443 12/49 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 436..472 4/22 (18%)
Forkhead_N 452..>534 CDD:254796 1/6 (17%)
SAM 541..606 CDD:197735
SAM_tumor-p63 543..607 CDD:188971
Transactivation inhibition. /evidence=ECO:0000250 610..680
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340689
Domainoid 1 1.000 65 1.000 Domainoid score I9777
eggNOG 1 0.900 - - E1_2C1DX
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002925
OrthoInspector 1 1.000 - - otm45413
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11447
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.800

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