Sequence 1: | NP_996246.1 | Gene: | Fancd2 / 2768674 | FlyBaseID: | FBgn0038827 | Length: | 1478 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006233967.1 | Gene: | Nup188 / 366016 | RGDID: | 1306022 | Length: | 1754 | Species: | Rattus norvegicus |
Alignment Length: | 1540 | Identity: | 307/1540 - (19%) |
---|---|---|---|
Similarity: | 508/1540 - (32%) | Gaps: | 542/1540 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 241 IEVIF--NRATESAKLDIIANAEL--------------ILDASMHDEFVELLNINYSSTEDLFHM 289
Fly 290 TTVQTLGNLSLSDRTQAKLRVRILDFATSGQ-CSDAILPHLIRLLLNVLKIDTDDSVRDLIGSLR 353
Fly 354 GIFNW---RHT---NETEKISASEDSKKSQLELFGFLELGLIRS-KKFYQACQRSSASVPAAEFT 411
Fly 412 SFDMILLLLLIHVNEDNSLYIENILRRRIKLEHITVS---------ILEEIRQHYRHILEQHITT 467
Fly 468 LMNILHDFMREKNRIVSDFAKSSYSILFKI--FNSIQK----NILK------------KLL---- 510
Fly 511 -------------ELTCDK-----------SSPHLTTMALELLRELQRKSAKDV-QNCATLLIPM 550
Fly 551 LDRISDLSLTQTRVAMDLLCHVAFPDPNLSPCLQLQEQVDMVVKKQLINSIDNIKKQGIIGCVQL 615
Fly 616 IDAMARIANNGVDRD-------EFIA-SVENVDSLPDGRGKMA---ANLIIRTEASIGNSTESLA 669
Fly 670 LFFEELATVF------NQRNEGTSGC------ELDNQFIAWACDLVTFRFQASFVTE-------N 715
Fly 716 VPETLKGIKLEYQLN-----------INELDDTDA-NTESDVLNIGINISKLVLSPK-------- 760
Fly 761 ----------VKACDSI-----------YVLAPL-----------FNYVRVLYK---HRHQDSLE 790
Fly 791 --SINALLGCAIVLPSFFEDDNYVSVFENFEAEQQKDILSIYFHTVNWMRVSISAFASQRDPPTR 853
Fly 854 RRVLSRLGELIRIEQRMKPLLARAPVDFVAPPYQFLTNVKLSNQNQKRPGPKPAAKLNATLPEPD 918
Fly 919 LTGNQPSIADFTIKVGQC-KTVKTKTDFEQMYGPRERY--RPMEVEIIMLLVEQKFVLNHQLEEE 980
Fly 981 QMGEFLGLLEL--RFLLEDVVQKLEAAVLRHHDSYDADSFRPHLAKPEDFICDLLPCLHEVNNHL 1043
Fly 1044 ITLGEAIDNQLTEVSHVYSNLDLFKDQFCYIKSCFGLCVRLFALYFAWSEWSDKSQEQLLHKSLL 1108
Fly 1109 KLQPKTQWKRL--EKQSVPQLANLT--------FQYFLKYEKSVLNLSTAVHLHRLLCNLLKLGS 1163
Fly 1164 LQSDASQPRFQQAEDLRILCGTL--LRRKWFHYSGTLDK--GGQCNIYLDELVKGFL-------K 1217
Fly 1218 KSNAKSQTELLTELVKQCSILNTKDKALTSFPNFKKANFPLLFRGLCEVL-----------IHSL 1271
Fly 1272 S--------------------------GQV------------SVDSRGD---------------- 1282
Fly 1283 -----------KLKLWESAVDLL-------NG----------------LLSIVQ----------- 1302
Fly 1303 ----QVEQPRNFGLF-LKHSLL--FLKLLLQHGMSALESIVREDPERLTRFLHELQKVTRFLHQL 1360
Fly 1361 CCHSKSIKNTAII-----------SYIPSLRETIE-TLVFRVKALLAANNCHSAFHMGNMINRDL 1413
Fly 1414 ---HGD---SIITPR--------SSFAGEENSDDELPADDTSVDE 1444 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fancd2 | NP_996246.1 | FANC | 132..1422 | CDD:302591 | 300/1508 (20%) |
Nup188 | XP_006233967.1 | Nup188 | 31..941 | CDD:287461 | 167/841 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
1 | 0.960 |