DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fancd2 and fancd2

DIOPT Version :9

Sequence 1:NP_996246.1 Gene:Fancd2 / 2768674 FlyBaseID:FBgn0038827 Length:1478 Species:Drosophila melanogaster
Sequence 2:XP_002934277.3 Gene:fancd2 / 100487938 XenbaseID:XB-GENE-984801 Length:1449 Species:Xenopus tropicalis


Alignment Length:1495 Identity:339/1495 - (22%)
Similarity:666/1495 - (44%) Gaps:201/1495 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 RTQSSSRNIATLSR----QPNNFFELVLVRAGVQLDQGD-SLILACDHVPIVSKLREIFTSASSY 130
            :.::||:....|.:    :.::.|..:|..:|:.|..|| ...:|.|......||.:.......:
 Frog    31 KCRTSSKKTKALPQDGVVENDSIFVQLLKSSGMTLKSGDRQNEIAVDQAVFQKKLHQALRKHPRH 95

  Fly   131 TDKMETFKTGLNAAMAPGSKLVQKLL-TGCTVDAAGEEQIYQSQNSMFMNFLMIDFMRDACVEVL 194
            .:.::.|.:||.:.:.........|| .|...:......:....:|:....|.::.::::.:..|
 Frog    96 PNVIQEFISGLESHIEDRDTFRNCLLPCGNRQETEASTMVGSFHDSLMKLLLGLEILQESVINTL 160

  Fly   195 LNKIEEVAKSDRVIMGKAAIPLPLLPLMLTQLRYLTASHKV----EIYSRIEVIFNRATESAKLD 255
            ..|:.|.....   :|...|.:|  .|::.|.::|   .::    ::..:|..:.:.|....:.|
 Frog   161 FEKLPEFLYDS---VGSDGISIP--RLIINQFKWL---DRILDCKDLTLKIMQLISVAPVDIQHD 217

  Fly   256 IIANAELILDASMHDEFVELLNINYSSTEDLFHMTTVQTLGNLSLSDRTQAKLRVRILDFATSGQ 320
            ||.:...||:.|.|::....||........| .:..:..|.:|:::....:::|..::...::.:
 Frog   218 IITSLPEILEDSQHNDVARELNSLLQQNTQL-TVPILDALSSLNINTDLLSEVRQSVMSTLSAVE 281

  Fly   321 CSDAILPHLIRLLLNVLKIDTDDSVRDLIGSLRGIFNWRHTNETEKISASEDSKKSQLELFG--- 382
            ..|  ||.:|:.:|:.  :...|:| ::|..||...:....:...:|.|:::.::::.:...   
 Frog   282 LED--LPVIIKFILHA--VTPSDAV-EVISELRKKLDLESCSSLAQIHATQNKERNKPQAGSSVN 341

  Fly   383 --------FLELGLIRSKKFYQACQRSSASVPAAEFTSFDMI--------LLLLLIHVNEDNS-- 429
                    .|.:.:|:|...:|. ..|.|.:.|.|  :.|.:        ::||:::..:.||  
 Frog   342 KTKSSDCVSLMMDVIKSAVRFQK-HMSEAWIKAIE--NVDTVGDHKVSDLIVLLILYTTQTNSSK 403

  Fly   430 LYIENILRRRIKLEHITVSILEEIRQHYRHILEQHITTLMNILHDFMREKNRIVSDFAKSSYSIL 494
            ...|.:||.:|:...|:..:|:...:::..:|..:..:::::....:|...:.|..|....|...
 Frog   404 KQAERVLRNKIRSGFISDQLLQNAFRNHSQVLRDYFPSILSLAQSMLRSAEQSVVSFGSLMYKSA 468

  Fly   495 FKIFNS-IQKNILKKLLELTCDKSSPHLTTMALELLRELQRKSAKDVQNCATLLIPMLDRISDLS 558
            |.:|:| .|:.::..|:...| ...|....::|::|.:|....|..|...|..:..:||.:.:|:
 Frog   469 FSVFDSYCQQEVVGALVTHVC-SGYPAEVDVSLDVLTDLVSSHAAAVALYAVFVKGILDYLDNLN 532

  Fly   559 LTQTRVAMDLLCHVAFPDPNLSPCLQLQEQVDMVVKKQLINSIDNIKKQGIIGCVQLIDAMARIA 623
            ..|.|....:|..:||.......  .:|:.:.:|::|||.::....|:.||||.|:::.:||...
 Frog   533 AQQIRKLFHILSVLAFSRGQEGS--HIQDDMFIVIRKQLSSTALKYKRIGIIGAVRMVGSMAVNK 595

  Fly   624 NNGVDRDEFIASVENVDSLPDGRGKMAANLIIRTEASIGNSTESLALFFEELATVFNQRNEGTSG 688
            .:|....|     .|..|....|...|...:::|.:.  ...|:.||:::||:::..:||     
 Frog   596 KHGSKNPE-----NNPLSAESFRQVTALLELVQTCSE--QVPEASALYYDELSSLVQKRN----- 648

  Fly   689 CELDNQFIAWACDLVTFRFQASFVTENVPETLKG-----IKLEYQLNINELDDTDANTESDVLNI 748
              ||...::|....|...||..||.:..| |::|     :|..|  |::| ||:......::|.:
 Frog   649 --LDPLVMSWVGKTVLTDFQDDFVDDLTP-TVEGNYIFPVKAMY--NLDE-DDSQGGIAINILPV 707

  Fly   749 ------------GINISKLVLSPKVKACDSIYVLAPLFNYVRVLYKHRHQDSLESINALLGCAIV 801
                        ..|..:.|:||   .|     |:|.|..:|:..:.:|:.:||.|:|||||   
 Frog   708 LSKDMCSRGAEQAANKEERVVSP---IC-----LSPFFRLLRLCIEDQHEGNLEEIDALLGC--- 761

  Fly   802 LPSFFEDDNYVSVFENFEAEQQKDILSIYFHTVNWMRVSISAFASQRDPPTRRRVLSRLGELIRI 866
             |.:..|.......|:...::::.:.|:.|..:||.|..::||..|:|...:.:||:||..:..:
 Frog   762 -PLYLTDLEITEKMESLSKQEREFLCSLLFFALNWFREIVNAFCKQQDLDMKSKVLTRLQNITWL 825

  Fly   867 EQRMKPLLARAP------VDFVAPPYQFLTNVKLS---NQNQKRPGPKPAAKLNATLPEPDLTGN 922
            :..::..||.:|      ..|.:.|.:.|.:...|   .:.:|....|.||..|::.....|..:
 Frog   826 QSVLEKCLAASPGYIPPSAQFDSEPQEVLPSAIASAPAKKAKKGKTQKSAASKNSSADSSQLEEH 890

  Fly   923 QPSIADFTIKVGQCKTVKTKTDFEQMYGP-------RERYRPMEVEIIMLLVEQKFVLNHQLEEE 980
            |.:      :..:.:..:.:.:.|:...|       |..:|.:::|:..:|  |..:|...:.:.
 Frog   891 QDT------EKSELEKTQPEKEKEESSKPTINLNSYRAYFRELDLEVFTVL--QCGLLTRSVLDS 947

  Fly   981 QMGE------FLGLLELRFLLEDVVQKLE---------AAVLRHHDSYDADSFRPHLAKPEDFIC 1030
            :|..      .||..||.|||||:.:|.|         ...|:...|.:....:.|...|::...
 Frog   948 EMHTKATEVVQLGPAELVFLLEDLFRKTEHMLTSTVKRVMFLKVKGSRNIGFSQLHQKTPQEVAQ 1012

  Fly  1031 DLLPCLHEVNNHLITLGEAIDNQLTEVSHVY--------------SNLDLFKDQFCYIKSCFGLC 1081
            .::..|:.:.||            ||..|.|              .::|:.:.|  |:.:|:.|.
 Frog  1013 AVIHLLNSLCNH------------TENMHNYFQTLMLENHGVVDAPSVDIKEHQ--YMSTCYQLL 1063

  Fly  1082 VRLFALYFAWSEWSDKSQEQLLHKSLLKLQPKTQWKRLEKQSVPQLANL---TFQYFLKYEKSVL 1143
            :::|...|.||.:|.....:||..:|:.|..:.:    |.::.|.|..|   :|.|......||.
 Frog  1064 LQVFHTLFCWSGFSQHENRKLLKSALIALAGRLK----ETEAEPALDELVRQSFNYLKNLHSSVP 1124

  Fly  1144 NLSTAVHLHRLLCNLLKLGSLQSDASQPRFQQAEDLRILCGTLLRRKWFHYSGTLDKGGQCNIYL 1208
            ..|:|:.|.:||..:.:..::        ....|.:..:....|.:.|...||..:||.:.:..|
 Frog  1125 TCSSALCLTQLLIVIAEKANV--------LHYREQIASMAKQFLCQPWIQPSGEREKGTRYHENL 1181

  Fly  1209 DELVKGFLKKSN--AKSQTEL----LTELVKQCSILNTKDKALTSFPNFKKANFPLLFRGL---- 1263
            ..|:..:|:.::  .|:..|:    :.|||..     .||...:|:|...:..|.:.||.:    
 Frog  1182 QSLLCIYLENTDDVLKAVEEIAGVGVPELVNA-----AKDAGSSSYPTLTRQTFIVFFRVMMDKL 1241

  Fly  1264 --CEVLIHSLSGQVSVDSRGDKLKLWESAVDLLNGLLSIVQQVEQPRNFGLFLKHSLLFLKLLLQ 1326
              |...|.|.....::..:.::|..|..||...:.|:::|:..:......:.||:..:|::..|:
 Frog  1242 EKCVKCIPSGKKAETLQEQTEQLLRWNLAVRDFHILVNLVKVFDSRPVLSICLKYGRMFVETFLK 1306

  Fly  1327 HGMSALESIVREDPERLTRFLHELQKVTRFLHQLCCHSKSIKNTAIISYIPSLRETIETLVFRVK 1391
            .||..|:...::..|.:...|..||..||.||.:|.|||..::||:.:::|.|::|:|..|:|||
 Frog  1307 LGMPLLDCCFKKHREDVQSLLKTLQLSTRQLHHMCGHSKIHQDTALTNHVPLLKKTLELFVYRVK 1371

  Fly  1392 ALLAANNCHSAFHMGNMINRDLHGDSIITPRSSFA-GEENSDDELP--ADDTSVDETVLGDDMGI 1453
            |:|..|||..||.:||:.||||.|:.|::..|..: |||..:.:||  .::|..:|...|.|..|
 Frog  1372 AMLVLNNCQDAFWLGNLKNRDLQGEEILSQVSQDSEGEEEQESQLPPEIEETEEEEENEGSDKEI 1436

  Fly  1454  1453
             Frog  1437  1436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fancd2NP_996246.1 FANC 132..1422 CDD:302591 315/1393 (23%)
fancd2XP_002934277.3 FancD2 41..1405 CDD:405336 327/1452 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 275 1.000 Domainoid score I1728
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13212
Inparanoid 1 1.050 307 1.000 Inparanoid score I2593
OMA 1 1.010 - - QHG55850
OrthoDB 1 1.010 - - D33210at33208
OrthoFinder 1 1.000 - - FOG0006538
OrthoInspector 1 1.000 - - oto102201
Panther 1 1.100 - - LDO PTHR32086
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5513
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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