DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and Lpo

DIOPT Version :10

Sequence 1:NP_996223.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_536345.2 Gene:Lpo / 76113 MGIID:1923363 Length:710 Species:Mus musculus


Alignment Length:610 Identity:208/610 - (34%)
Similarity:304/610 - (49%) Gaps:52/610 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 APPAVCE-KTAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADGIS-----APTRSVTGDELPS 153
            ||...|. .:.|||:.|.||:.:.|.||.||....|.|..:|.||:|     .|.:...|..||.
Mouse   125 APTMTCNISSPYRTITGYCNNRKNPALGSANRALARWLPAEYEDGLSLPYGWTPGKMRNGFPLPQ 189

  Fly   154 ARLVS--LVAF-GEQDVPDPEFTLHNMQWGQIMTHDMSMQAGGTQSKKHPTRCCTDDGRLIGLDT 215
            .|.||  :.|: .|:||.|.:.::..||||||:.|||.............|:...|:..:.|   
Mouse   190 PREVSNQIAAYLNEEDVLDQKRSMLFMQWGQIVDHDMDFAPETEMGSDTYTKAQCDEHCIQG--- 251

  Fly   216 AHKTCFAIIVPPHDPAYSQVGTECLNFVRTLTDRDSNC---QYQGGPAEQLTVVTSYLDLSLVYG 277
              ..||.|:.||.||.....| :|:.|.|.    ...|   .|:....||:..:||:||.||||.
Mouse   252 --DNCFPIMFPPGDPKLKTQG-KCMPFFRA----GFVCPTPPYKSLAREQINALTSFLDASLVYS 309

  Fly   278 NSIQQNSDIREFQG--GRMIVEER---NGAKWLPLSRNVTGDCDAVDASE--VCYRSGDVRVNQN 335
            ......:.:|....  |.|.|.|.   ||..:.|..:.....|:.::|:.  .|:.:||.|.::.
Mouse   310 PEPSLANRLRNLSSPLGLMAVNEEVSDNGRPFPPFVKMKPSPCEVINATAGVPCFLAGDSRASEQ 374

  Fly   336 PGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLGGENMLK 400
            ..||...|:.:|||||:|..||.||||:|..||:||||||..|..|..::.::|||.||.| |.|
Mouse   375 ILLATSHTLFIREHNRLATELSRLNPHWDRETLYQEARKIMGAFIQITTFRDYLPILLGDE-MQK 438

  Fly   401 NRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLSELRQVLGS---LTL-SD 461
                :..|...|    :.::||.:.|.. |.|.|:.|.:|...:..|.|..|..||   |.| :.
Mouse   439 ----WIPPYQGY----NESVDPRISNVF-TFALRFGHLEIPSTVYRLDENYQPWGSESELPLHTV 494

  Fly   462 WFNRPGIIEVGDNFDSLTRGHATQPEELTDIN--FDRQIKHFLFRRNMPF-GSDLRSLDIQRNRD 523
            :||...:::.| ..|.|.||...:..:|...|  ...::::.||:.|... |.||.|::|||:||
Mouse   495 FFNTWRLVKDG-GIDPLVRGLLAKNAKLMHQNKMMTGELRNKLFQPNHTIHGFDLASINIQRSRD 558

  Fly   524 HGLASYNDMREFCGLRRAHSWEGYGDLISPPIL-EKLKSLYPSHEDVDLTVGASLEAHVAGALAG 587
            ||...||..|.||||.:..:.|....::...:| :||..||.:..::|:.:||..|..|.....|
Mouse   559 HGQPGYNSWRAFCGLSQPKTLEELSAVMKNEVLAKKLMDLYGTPSNIDIWLGAVAEPLVHRGRVG 623

  Fly   588 PTFLCILTEQFYRTRVGDRFFFENGDKLTGFTPDQLEELRKASMARLLCDNGNHISSMQPEAFRT 652
            |...|:|.:||.|.|.||||::||...   ||..|.|.|:|.|.:||:||| ..|..:....|:.
Mouse   624 PLLTCLLGQQFQRIRDGDRFWWENPGV---FTEKQRESLQKMSFSRLVCDN-TGIDKVPLNPFQA 684

  Fly   653 VSHSNPIIPCSNIPQVDLTKWIDQK 677
            .::.:..:.||:|.::||:.|...|
Mouse   685 NAYPHGFVDCSSIDKLDLSPWASVK 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_996223.1 An_peroxidase 105..650 CDD:460804 197/570 (35%)
LpoNP_536345.2 myeloperoxidase_like 281..692 CDD:188656 146/425 (34%)

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