DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and TPO

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:XP_024308853.1 Gene:TPO / 7173 HGNCID:12015 Length:947 Species:Homo sapiens


Alignment Length:624 Identity:191/624 - (30%)
Similarity:279/624 - (44%) Gaps:81/624 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 PAVCEKTAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADGISAPTR-----SVTGDELPSARL 156
            |..|....||.:.|:||:.:.|..|.:|:...|.|.|.|.||.|.|..     ...|..||..|.
Human   155 PNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPVYEDGFSQPRGWNPGFLYNGFPLPPVRE 219

  Fly   157 VS---LVAFGEQDVPDPEFTLHNMQWGQIMTHDMSMQ---------AGGTQSKKHPTRCCTDDGR 209
            |:   :....|....|..::...|.|||.:.||::..         .||...:    ..|.:   
Human   220 VTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHDIAFTPQSTSKAAFGGGADCQ----MTCEN--- 277

  Fly   210 LIGLDTAHKTCFAIIVPPHDPAYSQVGTECLNFVRTLTDRDSNCQ-------YQGGPAEQLTVVT 267
                   ...||.|.:|  :.|....||.||.|.|:.....:..|       ....|.:|:..:|
Human   278 -------QNPCFPIQLP--EEARPAAGTACLPFYRSSAACGTGDQGALFGNLSTANPRQQMNGLT 333

  Fly   268 SYLDLSLVYGNSIQQNSDIREFQG--GRMIVEER---NGAKWLPLSRNVTGDCDAVDASE----- 322
            |:||.|.|||:|......:|.:..  |.:.|..|   :|..:||.   |.....|..|.|     
Human   334 SFLDASTVYGSSPALERQLRNWTSAEGLLRVHARLRDSGRAYLPF---VPPRAPAACAPEPGIPG 395

  Fly   323 ----VCYRSGDVRVNQNPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQI 383
                .|:.:||.|.::.|.|..|.|:.||||||:|.||.|||.|:....::|||||:..|.:|.|
Human   396 ETRGPCFLAGDGRASEVPSLTALHTLWLREHNRLAAALKALNAHWSADAVYQEARKVVGALHQII 460

  Fly   384 SYYEWLPIFLGGENMLKNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIE---GRLD 445
            :..:::|..||.|...:    |..|...|    |...:|:|.|..:|||||:.|:.|.   .|||
Human   461 TLRDYIPRILGPEAFQQ----YVGPYEGY----DSTANPTVSNVFSTAAFRFGHATIHPLVRRLD 517

  Fly   446 LLSELRQVLGSLTLSDWFNRPGIIEVGDNFDSLTRGHATQPEEL--TDINFDRQIKHFLFRRNMP 508
            ...:....|..|.|...|..|..:..|...|.|.||...:|.:|  .|...:.::...||..:..
Human   518 ASFQEHPDLPGLWLHQAFFSPWTLLRGGGLDPLIRGLLARPAKLQVQDQLMNEELTERLFVLSNS 582

  Fly   509 FGSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWEGYGDL----ISPPILEKLKSLYPSHEDV 569
            ...||.|:::||.|||||..||:.||||||.|.   |...||    .|..:.:|:..||...:::
Human   583 STLDLASINLQRGRDHGLPGYNEWREFCGLPRL---ETPADLSTAIASRSVADKILDLYKHPDNI 644

  Fly   570 DLTVGASLEAHVAGALAGPTFLCILTEQFYRTRVGDRFFFENGDKLTGFTPDQLEELRKASMARL 634
            |:.:|...|..:..|..||.|.|::.:|....|.||.|::||...   ||..|..||.|.|::|:
Human   645 DVWLGGLAENFLPRARTGPLFACLIGKQMKALRDGDWFWWENSHV---FTDAQRRELEKHSLSRV 706

  Fly   635 LCDNGNHISSMQPEAFRTVSHSNPIIPCSNIPQVDLTKW 673
            :||| ..::.:..:||:..........|.:|..::|..|
Human   707 ICDN-TGLTRVPMDAFQVGKFPEDFESCDSITGMNLEAW 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 183/584 (31%)
peroxinectin_like 260..638 CDD:188655 136/400 (34%)
TPOXP_024308853.1 thyroid_peroxidase 179..746 CDD:188657 183/600 (31%)
CCP 754..807 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165150051
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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